RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 RNF39Q9H2S5 420 aa21.2■□□□□ 0.98
UBXN1-212ENST00000531625 PLEKHA4Q9H4M7 779 aa21.2■□□□□ 0.98
UBXN1-212ENST00000531625 ZSWIM4Q9H7M6 989 aa21.2■□□□□ 0.98
UBXN1-212ENST00000531625 KCNJ14Q9UNX9 436 aa21.2■□□□□ 0.98
UBXN1-212ENST00000531625 KRBA1A5PL33 1030 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 NR1I2O75469 434 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 RFPL2O75678 378 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 MLH1P40692 756 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 MCM2P49736 904 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 NCBP1Q09161 790 aaKnown RBP21.19■□□□□ 0.98
UBXN1-212ENST00000531625 XKR9Q5GH70 373 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 SLC44A3Q8N4M1 653 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 RSAD2Q8WXG1 361 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 SMG7Q92540 1137 aaKnown RBP21.19■□□□□ 0.98
UBXN1-212ENST00000531625 GTF3C6Q969F1 213 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 ZNF707Q96C28 371 aaPredicted RBP21.19■□□□□ 0.98
UBXN1-212ENST00000531625 MYADMQ96S97 322 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 MTRQ99707 1265 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 CSRNP2Q9H175 543 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 SEMA4AQ9H3S1 761 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 SH2B1Q9NRF2 756 aaPredicted RBP21.19■□□□□ 0.98
UBXN1-212ENST00000531625 BMP2KQ9NSY1 1161 aaPredicted RBP21.19■□□□□ 0.98
UBXN1-212ENST00000531625 RGL1Q9NZL6 768 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 GIT1Q9Y2X7 761 aa21.19■□□□□ 0.98
UBXN1-212ENST00000531625 MTCL1Q9Y4B5 1905 aaKnown RBP21.19■□□□□ 0.98
UBXN1-212ENST00000531625 OTOGLQ3ZCN5 2332 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 SRFP11831 508 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 SCNN1GP51170 649 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 SPIRE1Q08AE8 756 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 ZFP42Q96MM3 310 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 COLEC11Q9BWP8 271 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 XPNPEP1Q9NQW7 623 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.18■□□□□ 0.98
UBXN1-212ENST00000531625 MIOSQ9NXC5 875 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 ZDHHC7Q9NXF8 308 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.18■□□□□ 0.98
UBXN1-212ENST00000531625 FNIP2Q9P278 1114 aa21.18■□□□□ 0.98
UBXN1-212ENST00000531625 ZBTB39O15060 712 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 CCNT1O60563 726 aaKnown RBP21.17■□□□□ 0.98
UBXN1-212ENST00000531625 CDKL5O76039 1030 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 CFHP08603 1231 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 TFDP1Q14186 410 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 CCDC83Q8IWF9 413 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 HACE1Q8IYU2 909 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 DYDC2Q96IM9 177 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 NT5C3AQ9H0P0 336 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 HES2Q9Y543 173 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 CEP250Q9BV73 2442 aa21.17■□□□□ 0.98
UBXN1-212ENST00000531625 TDRD15B5MCY1 1934 aaKnown RBP21.16■□□□□ 0.98
UBXN1-212ENST00000531625 ZMYM2Q9UBW7 1377 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 F8W810 466 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 INO80B-WBP1J3KQ70 363 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 STK25O00506 426 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 MARCH6O60337 910 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 ID4P47928 161 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 AMHR2Q16671 573 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 USP41Q3LFD5 358 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 NCAPH2Q6IBW4 605 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 LILRA6Q6PI73 481 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 SLFN12Q8IYM2 578 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 CPB2Q96IY4 423 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 NFKBIZQ9BYH8 718 aa21.16■□□□□ 0.98
UBXN1-212ENST00000531625 ARID2Q68CP9 1835 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 STK36Q9NRP7 1315 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 TGM5O43548 720 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 SLITRK3O94933 977 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 LYPLA2O95372 231 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 SPATA31D3P0C874 917 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 LAMP2P13473 410 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 XBP1P17861 261 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 ARF4P18085 180 aaPredicted RBP21.15■□□□□ 0.98
UBXN1-212ENST00000531625 CYP4A11Q02928 519 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 CREMQ03060 361 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 MBTD1Q05BQ5 628 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 CTTNQ14247 550 aaKnown RBP21.15■□□□□ 0.98
UBXN1-212ENST00000531625 PHLDB3Q6NSJ2 640 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 FUT10Q6P4F1 479 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 SPATA31D4Q6ZUB0 917 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 PIK3AP1Q6ZUJ8 805 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 PALB2Q86YC2 1186 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 TPH2Q8IWU9 490 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 GSTCDQ8NEC7 633 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 TMX3Q96JJ7 454 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 GPR62Q9BZJ7 368 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 PRKD2Q9BZL6 878 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 TRIM6Q9C030 488 aaPredicted RBP21.15■□□□□ 0.98
UBXN1-212ENST00000531625 TBC1D17Q9HA65 648 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 PIDD1Q9HB75 910 aa21.15■□□□□ 0.98
UBXN1-212ENST00000531625 CACNA1IQ9P0X4 2223 aa21.14■□□□□ 0.98
UBXN1-212ENST00000531625 ANHXE9PGG2 379 aa21.14■□□□□ 0.97
UBXN1-212ENST00000531625 DTNBO60941 627 aa21.14■□□□□ 0.97
UBXN1-212ENST00000531625 BAG4O95429 457 aaKnown RBP21.14■□□□□ 0.97
UBXN1-212ENST00000531625 MYBP10242 640 aa21.14■□□□□ 0.97
UBXN1-212ENST00000531625 RFX1P22670 979 aa21.14■□□□□ 0.97
UBXN1-212ENST00000531625 ARL2P36404 184 aa21.14■□□□□ 0.97
UBXN1-212ENST00000531625 ST3GAL1Q11201 340 aa21.14■□□□□ 0.97
UBXN1-212ENST00000531625 OXER1Q8TDS5 423 aa21.14■□□□□ 0.97
UBXN1-212ENST00000531625 HSD17B14Q9BPX1 270 aa21.14■□□□□ 0.97
UBXN1-212ENST00000531625 NXF3Q9H4D5 531 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms