RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 RBM23Q86U06 439 aaKnown RBP15.9■□□□□ 0.14
FOXR1-202ENST00000531539 SLC39A11Q8N1S5 342 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 TMEM161BQ8NDZ6 487 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 KCNG4Q8TDN1 519 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 MRPL4Q9BYD3 311 aaKnown RBP15.9■□□□□ 0.14
FOXR1-202ENST00000531539 TLR9Q9NR96 1032 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 RCOR1Q9UKL0 485 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 PCDHA7Q9UN72 937 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 COG5Q9UP83 839 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 FAN1Q9Y2M0 1017 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 GDAQ9Y2T3 454 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 PCDHGC5Q9Y5F6 944 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 PHLPP2Q6ZVD8 1323 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 RALGAPA2Q2PPJ7 1873 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 MYMKA6NI61 221 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 TRAK2O60296 914 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 B4GALT3O60512 393 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 MAPTP10636 758 aaKnown RBP15.89■□□□□ 0.13
FOXR1-202ENST00000531539 DCAF4L1Q3SXM0 396 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 AXDND1Q5T1B0 1012 aaPredicted RBP15.89■□□□□ 0.13
FOXR1-202ENST00000531539 SHC4Q6S5L8 630 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 TMC7Q7Z402 723 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 ATXN2LQ8WWM7 1075 aaKnown RBP15.89■□□□□ 0.13
FOXR1-202ENST00000531539 DDX12PQ92771 950 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 TMEM169Q96HH4 297 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 CHAMP1Q96JM3 812 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 ZBTB45Q96K62 511 aaPredicted RBP15.89■□□□□ 0.13
FOXR1-202ENST00000531539 PARVGQ9HBI0 331 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 LZTS1Q9Y250 596 aa15.89■□□□□ 0.13
FOXR1-202ENST00000531539 H0YCG3 227 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 NRP1O14786 923 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 NMT1P30419 496 aaKnown RBP15.88■□□□□ 0.13
FOXR1-202ENST00000531539 CA8P35219 290 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 GTF2F1P35269 517 aaKnown RBP eCLIP15.88■□□□□ 0.13
FOXR1-202ENST00000531539 OR1G1P47890 313 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 NCKAP1LP55160 1127 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 OSTNP61366 133 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 HYAL1Q12794 435 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 ADGRD2Q7Z7M1 963 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 STAMQ92783 540 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 PPP2R3CQ969Q6 453 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 IGSF21Q96ID5 467 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 ASB2Q96Q27 587 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 RPS6KC1Q96S38 1066 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 TLE6Q9H808 572 aa15.88■□□□□ 0.13
FOXR1-202ENST00000531539 COL4A4P53420 1690 aaPredicted RBP15.88■□□□□ 0.13
FOXR1-202ENST00000531539 CDH23Q9H251 3354 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.87■□□□□ 0.13
FOXR1-202ENST00000531539 CARNS1A5YM72 827 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 K7ENM7 598 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 PER2O15055 1255 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 INPPL1O15357 1258 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 NCK2O43639 380 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 NR1I2O75469 434 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 CXCL14O95715 111 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 HARSP12081 509 aaKnown RBP15.87■□□□□ 0.13
FOXR1-202ENST00000531539 IDEP14735 1019 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 MATR3P43243 847 aaKnown RBP eCLIP15.87■□□□□ 0.13
FOXR1-202ENST00000531539 NRIP1P48552 1158 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 ZNF131P52739 623 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 AAK1Q2M2I8 961 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 TPRNQ4KMQ1 711 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 PLPP4Q5VZY2 271 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 PDE12Q6L8Q7 609 aaKnown RBP15.87■□□□□ 0.13
FOXR1-202ENST00000531539 TMEM173Q86WV6 379 aaPredicted RBP15.87■□□□□ 0.13
FOXR1-202ENST00000531539 FAM178BQ8IXR5 827 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 COLGALT2Q8IYK4 626 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 GSTCDQ8NEC7 633 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 BCL7CQ8WUZ0 217 aaPredicted RBP15.87■□□□□ 0.13
FOXR1-202ENST00000531539 DHX58Q96C10 678 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 BICD1Q96G01 975 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 TCF25Q9BQ70 676 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 TMEM175Q9BSA9 504 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 CXCL16Q9H2A7 254 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 UBE2ZQ9H832 354 aaPredicted RBP15.87■□□□□ 0.13
FOXR1-202ENST00000531539 PTPRHQ9HD43 1115 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 ENTPD7Q9NQZ7 604 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 CLDND1Q9NY35 253 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 FAM13BQ9NYF5 915 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 TBX20Q9UMR3 447 aa15.87■□□□□ 0.13
FOXR1-202ENST00000531539 PRG3Q9Y2Y8 225 aaPredicted RBP15.87■□□□□ 0.13
FOXR1-202ENST00000531539 FSCN2O14926 492 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 RECQL4O94761 1208 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 MCF2P10911 925 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 KCNA5P22460 613 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 KRT85P78386 507 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 BMS1Q14692 1282 aaKnown RBP15.86■□□□□ 0.13
FOXR1-202ENST00000531539 ZNF568Q3ZCX4 644 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 MPZL3Q6UWV2 235 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 DDX53Q86TM3 631 aaKnown RBP15.86■□□□□ 0.13
FOXR1-202ENST00000531539 VPS52Q8N1B4 723 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 IQUBQ8NA54 791 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 RABGGTAQ92696 567 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 DNAJC19Q96DA6 116 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 SPATA32Q96LK8 384 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 CCDC94Q9BW85 323 aaPredicted RBP15.86■□□□□ 0.13
FOXR1-202ENST00000531539 COLEC11Q9BWP8 271 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 CDT1Q9H211 546 aa15.86■□□□□ 0.13
FOXR1-202ENST00000531539 NGRNQ9NPE2 291 aaKnown RBP15.86■□□□□ 0.13
FOXR1-202ENST00000531539 TBC1D7Q9P0N9 293 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms