RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 CLCN4P51793 760 aa24.64■■□□□ 1.54
TRAPPC4-210ENST00000531290 CDCA2Q69YH5 1023 aaPredicted RBP24.64■■□□□ 1.54
TRAPPC4-210ENST00000531290 TAS1R1Q7RTX1 841 aa24.64■■□□□ 1.54
TRAPPC4-210ENST00000531290 RPS6KC1Q96S38 1066 aa24.64■■□□□ 1.54
TRAPPC4-210ENST00000531290 HERC2P3Q9BVR0 1158 aa24.64■■□□□ 1.54
TRAPPC4-210ENST00000531290 SFXN1Q9H9B4 322 aa24.64■■□□□ 1.54
TRAPPC4-210ENST00000531290 KLK14Q9P0G3 267 aa24.64■■□□□ 1.54
TRAPPC4-210ENST00000531290 LRWD1Q9UFC0 647 aa24.64■■□□□ 1.54
TRAPPC4-210ENST00000531290 C2CD4DB7Z1M9 353 aa24.63■■□□□ 1.53
TRAPPC4-210ENST00000531290 HOXD11P31277 338 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC4-210ENST00000531290 FXR2P51116 673 aaKnown RBP eCLIP24.63■■□□□ 1.53
TRAPPC4-210ENST00000531290 MAPK6Q16659 721 aa24.63■■□□□ 1.53
TRAPPC4-210ENST00000531290 FAM187BQ17R55 369 aa24.63■■□□□ 1.53
TRAPPC4-210ENST00000531290 C8orf34Q49A92 452 aa24.63■■□□□ 1.53
TRAPPC4-210ENST00000531290 DEPTORQ8TB45 409 aa24.63■■□□□ 1.53
TRAPPC4-210ENST00000531290 STK24Q9Y6E0 443 aa24.63■■□□□ 1.53
TRAPPC4-210ENST00000531290 N4BP3O15049 544 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 ADH1AP07327 375 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 U2AF2P26368 475 aaKnown RBP eCLIP24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 NAMPTP43490 491 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 GLUD2P49448 558 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 GRIK3Q13003 919 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 PRPF4BQ13523 1007 aaKnown RBP24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 PDIA5Q14554 519 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 NBR1Q14596 966 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 PPP2R5AQ15172 486 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 ELMSAN1Q6PJG2 1045 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 GPR149Q86SP6 731 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 PLCD3Q8N3E9 789 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 C4orf32Q8N8J7 132 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 TDRD5Q8NAT2 981 aaKnown RBP24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 KREMEN2Q8NCW0 462 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 IFT74Q96LB3 600 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 RAB34Q9BZG1 259 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 UPF2Q9HAU5 1272 aaKnown RBP24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 DPP7Q9UHL4 492 aa24.62■■□□□ 1.53
TRAPPC4-210ENST00000531290 LIG1P18858 919 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 KIAA0319Q5VV43 1072 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 FBXL6Q8N531 539 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 GSTCDQ8NEC7 633 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 BSNDQ8WZ55 320 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 ADPGKQ9BRR6 497 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 BHMT2Q9H2M3 363 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 KIAA1024Q9UPX6 916 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 USTQ9Y2C2 406 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 KIF3AQ9Y496 699 aa24.61■■□□□ 1.53
TRAPPC4-210ENST00000531290 ZMYM2Q9UBW7 1377 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 ACKR2O00590 384 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 TEX28O15482 410 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 TADA2AO75478 443 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 PRKCBP05771 671 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 PTGDRQ13258 359 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 MTMR3Q13615 1198 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 UBALD2Q8IYN6 164 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 ZDHHC14Q8IZN3 488 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 ACSF2Q96CM8 615 aaPredicted RBP24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 SORCS3Q9UPU3 1222 aa24.6■■□□□ 1.53
TRAPPC4-210ENST00000531290 F8W810 466 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 ST18O60284 1047 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 DSG1Q02413 1049 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 RABEP1Q15276 862 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 ECM1Q16610 540 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 USP41Q3LFD5 358 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 RNF168Q8IYW5 571 aaPredicted RBP24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 SNX29Q8TEQ0 813 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 KIFAP3Q92845 792 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 ASIC4Q96FT7 647 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 PDZD7Q9H5P4 517 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 RXFP1Q9HBX9 757 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 CHST7Q9NS84 486 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 LIMD1Q9UGP4 676 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 ADAM28Q9UKQ2 775 aa24.59■■□□□ 1.53
TRAPPC4-210ENST00000531290 TTLL13PA6NNM8 815 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 EFEMP2O95967 443 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 GLUD1P00367 558 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 TOB1P50616 345 aaPredicted RBP24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 EFNA5P52803 228 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 FUT10Q6P4F1 479 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 C15orf39Q6ZRI6 1047 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 CCDC149Q6ZUS6 474 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 OTOP3Q7RTS5 596 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 RABGGTAQ92696 567 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 POLD4Q9HCU8 107 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 MAN1C1Q9NR34 630 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 DDX19AQ9NUU7 478 aaKnown RBP24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 SNTG2Q9NY99 539 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 DNM3Q9UQ16 869 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 PCDHB6Q9Y5E3 794 aa24.58■■□□□ 1.53
TRAPPC4-210ENST00000531290 TRIOO75962 3097 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 LAD1O00515 517 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 KRT79Q5XKE5 535 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 MCTP1Q6DN14 999 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 IGSF22Q8N9C0 903 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 PRRX2Q99811 253 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 GPR62Q9BZJ7 368 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 CCDC113Q9H0I3 377 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 DAXXQ9UER7 740 aaPredicted RBP24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 USP20Q9Y2K6 914 aa24.57■■□□□ 1.52
TRAPPC4-210ENST00000531290 THP07101 528 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms