RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 FGAP02671 866 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 ANPEPP15144 967 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 AMPD1P23109 780 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 TKTP29401 623 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 MTIF2P46199 727 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 PLTPP55058 493 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 POLR2FP61218 127 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 PPIDQ08752 370 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 THOC5Q13769 683 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 ZNF423Q2M1K9 1284 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 SNRNP48Q6IEG0 339 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 PASD1Q8IV76 773 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 TMCO5AQ8N6Q1 288 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 FBXO25Q8TCJ0 367 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 DDX12PQ92771 950 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 NSMCE3Q96MG7 304 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 BTBD10Q9BSF8 475 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 KCNK9Q9NPC2 374 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 SAR1AQ9NR31 198 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 ZDHHC7Q9NXF8 308 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 FBXO9Q9UK97 447 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 NR2E1Q9Y466 385 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 RGPD5Q99666 1765 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 KIF1AQ12756 1690 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 RNF113AO15541 343 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 RNMTO43148 476 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 BUD23O43709 281 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 AP1G1O43747 822 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 HNRNPCL1O60812 293 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 SCG2P13521 617 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 FGFR4P22455 802 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 STX2P32856 288 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 RPL5P46777 297 aaKnown RBP8.3□□□□□ -1.08
PTPRK-219ENST00000531050 PTPROQ16827 1216 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 NADK2Q4G0N4 442 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 UGT2A3Q6UWM9 527 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 MPRIPQ6WCQ1 1025 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 CABP7Q86V35 215 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 LRRC57Q8N9N7 239 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 C10orf82Q8WW14 230 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 OSBP2Q969R2 916 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 COX4I2Q96KJ9 171 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 ERP44Q9BS26 406 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 MYL10Q9BUA6 226 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 PPP1R9AQ9ULJ8 1098 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 HEG1Q9ULI3 1381 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 PSMA7O14818 248 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 ZBTB43O43298 467 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 TLR2O60603 784 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 TRMUO75648 421 aaKnown RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 IGBP1P78318 339 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 COG7P83436 770 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 PTK7Q13308 1070 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 LRP8Q14114 963 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 MYLK3Q32MK0 819 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 ZNF804AQ7Z570 1209 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 PHLDB2Q86SQ0 1253 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 PDSS2Q86YH6 399 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 PTCD3Q96EY7 689 aaKnown RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 MAELQ96JY0 434 aaKnown RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 GRHL1Q9NZI5 618 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 FAF1Q9UNN5 650 aaPredicted RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 COQ6Q9Y2Z9 468 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 PFASO15067 1338 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 C5P01031 1676 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 SPECC1L-ADORA2AF8WAN1 911 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 GOLGA8TH3BQL2 631 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 KIAA0391O15091 583 aaKnown RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 MAGEB2O15479 319 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 CCDC22O60826 627 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 DKC1O60832 514 aaKnown RBP eCLIP8.29□□□□□ -1.087e-7■■■■■ 37.2
PTPRK-219ENST00000531050 GCP02774 474 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 GOLGA8HP0CJ92 632 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 LONRF1Q17RB8 773 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 EARS2Q5JPH6 523 aaKnown RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 VASH1Q7L8A9 365 aaPredicted RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 TTC30AQ86WT1 665 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 TTLL11Q8NHH1 800 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 CEP295NLQ96MC4 621 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 SENP6Q9GZR1 1112 aaPredicted RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 MMRN2Q9H8L6 949 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.082e-7■■□□□ 13
PTPRK-219ENST00000531050 ASAP1Q9ULH1 1129 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 DMTF1Q9Y222 760 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 SNX24Q9Y343 169 aa8.29□□□□□ -1.08
PTPRK-219ENST00000531050 PARP4Q9UKK3 1724 aaKnown RBP8.29□□□□□ -1.08
PTPRK-219ENST00000531050 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 CCDC160A6NGH7 325 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 A8MXQ7 604 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 KLRC4O43908 158 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 KDM1AO60341 852 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 USP1O94782 785 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 TFPTP0C1Z6 253 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 BRAFP15056 766 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 BCAP31P51572 246 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 CHN2P52757 468 aa8.28□□□□□ -1.08
PTPRK-219ENST00000531050 MED21Q13503 144 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms