RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PTGIRP43119 386 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 NEK3P51956 506 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF174Q15697 407 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 TDRD12Q587J7 1177 aaKnown RBP8.69□□□□□ -1.02
CSDE1-214ENST00000530886 FAM91A1Q658Y4 838 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 NEPROQ6NW34 567 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 NT5DC3Q86UY8 548 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 OGFOD1Q8N543 542 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 KIAA0895Q8NCT3 520 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 FBXO25Q8TCJ0 367 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 ART4Q93070 314 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 DDX50Q9BQ39 737 aaKnown RBP8.69□□□□□ -1.02
CSDE1-214ENST00000530886 PCYOX1Q9UHG3 505 aa8.69□□□□□ -1.02
CSDE1-214ENST00000530886 TBC1D12O60347 775 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 RNASEH1O60930 286 aaKnown RBP8.68□□□□□ -1.02
CSDE1-214ENST00000530886 HSPA6P17066 643 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 NEK2P51955 445 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 FKBP4Q02790 459 aaKnown RBP eCLIP8.68□□□□□ -1.02
CSDE1-214ENST00000530886 MPP2Q14168 576 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 GRAMD4Q6IC98 578 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 CYFIP1Q7L576 1253 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 JAMLQ86YT9 394 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 SPZ1Q9BXG8 430 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 USP29Q9HBJ7 922 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 GPAMQ9HCL2 828 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 PFDN4Q9NQP4 134 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 ARHGEF38Q9NXL2 777 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 DBR1Q9UK59 544 aaKnown RBP8.68□□□□□ -1.02
CSDE1-214ENST00000530886 TELO2Q9Y4R8 837 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 PFASO15067 1338 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 FRMPD4Q14CM0 1322 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 MATN2O00339 956 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF862O60290 1169 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 TTLL1O95922 423 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 FOXN2P32314 431 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 DNA2P51530 1060 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 IL9RQ01113 521 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.68□□□□□ -1.02
CSDE1-214ENST00000530886 EAPPQ56P03 285 aaPredicted RBP8.68□□□□□ -1.02
CSDE1-214ENST00000530886 FAM83BQ5T0W9 1011 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 DAAM2Q86T65 1068 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 PLEKHO2Q8TD55 490 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 STMN2Q93045 179 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 VPS50Q96JG6 964 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 TCHPQ9BT92 498 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 PACSIN1Q9BY11 444 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 AXIN2Q9Y2T1 843 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 FAM32AQ9Y421 112 aaKnown RBP8.68□□□□□ -1.02
CSDE1-214ENST00000530886 MAGEC1O60732 1142 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 DNAJC6O75061 913 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 FGRP09769 529 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 HALP42357 657 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 CREB5Q02930 508 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 LRRC63Q05C16 580 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 CCDC153Q494R4 210 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 KLHL35Q6PF15 583 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 RSPH3Q86UC2 560 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 IFNL3Q8IZI9 196 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 CYP4X1Q8N118 509 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 CTNNBL1Q8WYA6 563 aaPredicted RBP8.68□□□□□ -1.02
CSDE1-214ENST00000530886 PLA2G12BQ9BX93 195 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 C10orf71Q711Q0 1435 aa8.68□□□□□ -1.02
CSDE1-214ENST00000530886 CNTNAP5Q8WYK1 1306 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 BAZ2BQ9UIF8 2168 aaKnown RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 SH3PXD2BA1X283 911 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 NDC80O14777 642 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 EDF1O60869 148 aaKnown RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 KRT38O76015 456 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ZBED1O96006 694 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 VEGFAP15692 232 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 TRPC1P48995 793 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 RRP1BQ14684 758 aaKnown RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 KRT72Q14CN4 511 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 HSP90AA5PQ58FG0 334 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 CNNM4Q6P4Q7 775 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 IZUMO2Q6UXV1 221 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 LRRC55Q6ZSA7 311 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 MIGA2Q7L4E1 593 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 PEX26Q7Z412 305 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 PHLDB2Q86SQ0 1253 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 PDSS2Q86YH6 399 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 IQCF2Q8IXL9 164 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ABTB2Q8N961 1025 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 SCAIQ8N9R8 606 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 SPATA5Q8NB90 893 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ABTB1Q969K4 478 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.029e-6■□□□□ 8.3
CSDE1-214ENST00000530886 DMTF1Q9Y222 760 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 AMOTL2Q9Y2J4 779 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 TNS2Q63HR2 1409 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 TP73O15350 636 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 DDX3YO15523 660 aaKnown RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 BUD23O43709 281 aaKnown RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 EXOC3O60645 756 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 HOXA10P31260 410 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 CHRNA3P32297 505 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 RPL5P46777 297 aaKnown RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 PLTPP55058 493 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 TROAPQ12815 778 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 CDC16Q13042 620 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms