RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 IKZF4Q9H2S9 585 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 KRIT1O00522 736 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 CLIC2O15247 247 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 EVI5O60447 810 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 SLC9A1P19634 815 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 NMT1P30419 496 aaKnown RBP20.6■□□□□ 0.89
LTBP3-217ENST00000530785 COPS2P61201 443 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 SF3A3Q12874 501 aaKnown RBP eCLIP20.6■□□□□ 0.895e-7■■■■□ 19.9
LTBP3-217ENST00000530785 MYCT1Q8N699 235 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 GBP7Q8N8V2 638 aaPredicted RBP20.6■□□□□ 0.89
LTBP3-217ENST00000530785 LRRC57Q8N9N7 239 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 NAF1Q96HR8 494 aaKnown RBP20.6■□□□□ 0.89
LTBP3-217ENST00000530785 FAM167BQ9BTA0 163 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 ZNF341Q9BYN7 854 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 SPON1Q9HCB6 807 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 INTS9Q9NV88 658 aaKnown RBP20.6■□□□□ 0.89
LTBP3-217ENST00000530785 AIPL1Q9NZN9 384 aa20.6■□□□□ 0.89
LTBP3-217ENST00000530785 FRMPD4Q14CM0 1322 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 TTI1O43156 1089 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 TGFB1I1O43294 461 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 WFS1O76024 890 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 RTN3O95197 1032 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 MSH2P43246 934 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 CTCFP49711 727 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 RASGEF1CQ8N431 466 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 KLHL29Q96CT2 875 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 PRMT1Q99873 361 aaKnown RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 WDR11Q9BZH6 1224 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 CCPG1Q9ULG6 757 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 ATP8A1Q9Y2Q0 1164 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 CD2APQ9Y5K6 639 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 ZNF536O15090 1300 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 SLC16A3O15427 465 aaKnown RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 SHBGP04278 402 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 VIMP08670 466 aaKnown RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 ROR2Q01974 943 aaKnown RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 MAP3K10Q02779 954 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 TAF11Q15544 211 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 ENOX2Q16206 610 aaKnown RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 ZC2HC1CQ53FD0 456 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 ASRGL1Q7L266 308 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 METTL13Q8N6R0 699 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 ATP8B4Q8TF62 1192 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 VPS33BQ9H267 617 aa20.59■□□□□ 0.89
LTBP3-217ENST00000530785 PAPOLBQ9NRJ5 636 aaKnown RBP20.59■□□□□ 0.89
LTBP3-217ENST00000530785 IPO5O00410 1097 aaKnown RBP20.58■□□□□ 0.89
LTBP3-217ENST00000530785 ABLIM1O14639 778 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 EIF3DO15371 548 aaKnown RBP eCLIP20.58■□□□□ 0.89
LTBP3-217ENST00000530785 ICAM1P05362 532 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 ITGA4P13612 1032 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 RPL13P26373 211 aaKnown RBP20.58■□□□□ 0.89
LTBP3-217ENST00000530785 KLHL30Q0D2K2 578 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 ASIC2Q16515 512 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 TCERG1LQ5VWI1 586 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 B3GNT9Q6UX72 402 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 APLFQ8IW19 511 aaPredicted RBP20.58■□□□□ 0.89
LTBP3-217ENST00000530785 SLC35C1Q96A29 364 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 FAM210AQ96ND0 272 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 FMO2Q99518 471 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 TSC22D3Q99576 134 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 PARVGQ9HBI0 331 aa20.58■□□□□ 0.89
LTBP3-217ENST00000530785 UCHL3P15374 230 aa20.58■□□□□ 0.88
LTBP3-217ENST00000530785 PON1P27169 355 aa20.58■□□□□ 0.88
LTBP3-217ENST00000530785 HSD17B4P51659 736 aa20.58■□□□□ 0.88
LTBP3-217ENST00000530785 POU5F1Q01860 360 aaKnown RBP20.58■□□□□ 0.88
LTBP3-217ENST00000530785 EXOC3L4Q17RC7 722 aa20.58■□□□□ 0.88
LTBP3-217ENST00000530785 IFT74Q96LB3 600 aa20.58■□□□□ 0.88
LTBP3-217ENST00000530785 TEKT3Q9BXF9 490 aa20.58■□□□□ 0.88
LTBP3-217ENST00000530785 METTL14Q9HCE5 456 aaKnown RBP20.58■□□□□ 0.88
LTBP3-217ENST00000530785 COL20A1Q9P218 1284 aa20.58■□□□□ 0.88
LTBP3-217ENST00000530785 UTP11Q9Y3A2 253 aaKnown RBP20.58■□□□□ 0.88
LTBP3-217ENST00000530785 USP15Q9Y4E8 981 aaPredicted RBP20.58■□□□□ 0.88
LTBP3-217ENST00000530785 BRCA1P38398 1863 aaKnown RBP20.57■□□□□ 0.88
LTBP3-217ENST00000530785 DPPA5A6NC42 116 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 NFIBO00712 420 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 PDE6CP51160 858 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 LACTBP83111 547 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-217ENST00000530785 EPHA7Q15375 998 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 DALRD3Q5D0E6 543 aaKnown RBP20.57■□□□□ 0.88
LTBP3-217ENST00000530785 FIZ1Q96SL8 496 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 LXNQ9BS40 222 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 DEFB129Q9H1M3 183 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 MYOZ2Q9NPC6 264 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 PCDHB13Q9Y5F0 798 aa20.57■□□□□ 0.88
LTBP3-217ENST00000530785 CCDC169A6NNP5 214 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 FLOT1O75955 427 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 ITGB5P18084 799 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 GCLCP48506 637 aaPredicted RBP20.56■□□□□ 0.88
LTBP3-217ENST00000530785 ATP11AP98196 1134 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 KSR1Q8IVT5 923 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 NACC1Q96RE7 527 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 MXRA8Q9BRK3 442 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.56■□□□□ 0.88
LTBP3-217ENST00000530785 DPH5Q9H2P9 285 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 ADAMTS1Q9UHI8 967 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 BCS1LQ9Y276 419 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 LRRC42Q9Y546 428 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 FER1L6Q2WGJ9 1857 aa20.56■□□□□ 0.88
LTBP3-217ENST00000530785 DDX39AO00148 427 aaKnown RBP20.56■□□□□ 0.88
LTBP3-217ENST00000530785 MUTP22033 750 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms