RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 C12orf56Q8IXR9 622 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 THNSL1Q8IYQ7 743 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 XXYLT1Q8NBI6 393 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 DBF4BQ8NFT6 615 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 CCDC51Q96ER9 411 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 FAM213AQ9BRX8 229 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 CDT1Q9H211 546 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 PTPRHQ9HD43 1115 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 MAGEC2Q9UBF1 373 aaPredicted RBP16.76■□□□□ 0.27
LTBP3-216ENST00000530426 ZMYND8Q9ULU4 1186 aaPredicted RBP16.76■□□□□ 0.27
LTBP3-216ENST00000530426 FRMD4BQ9Y2L6 1034 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 STYXL1Q9Y6J8 313 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
LTBP3-216ENST00000530426 CENPFP49454 3210 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 ALPK3Q96L96 1907 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 A0A0B4J269 797 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 IKBKBO14920 756 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 KIAA0391O15091 583 aaKnown RBP16.75■□□□□ 0.27
LTBP3-216ENST00000530426 LDHAP00338 332 aaKnown RBP16.75■□□□□ 0.27
LTBP3-216ENST00000530426 CSF2RAP15509 400 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 PROZP22891 400 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 MCL1Q07820 350 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 GPNMBQ14956 572 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 IQCB1Q15051 598 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 NFIL3Q16649 462 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 CCDC40Q4G0X9 1142 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 SEZ6Q53EL9 994 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 PLEKHG4Q58EX7 1191 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 FOXR2Q6PJQ5 311 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 SLC9A9Q8IVB4 645 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 GPD1LQ8N335 351 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 APBB2Q92870 758 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 CEP63Q96MT8 703 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 ADAM2Q99965 735 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 APOL6Q9BWW8 343 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 EIF2AQ9BY44 585 aaKnown RBP16.75■□□□□ 0.27
LTBP3-216ENST00000530426 HAPLN2Q9GZV7 340 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 RBSNQ9H1K0 784 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 TMX1Q9H3N1 280 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 FANCLQ9NW38 375 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 PCDH10Q9P2E7 1040 aa16.75■□□□□ 0.27
LTBP3-216ENST00000530426 OGTO15294 1046 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 EXTL3O43909 919 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 MGEA5O60502 916 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 EPB41P11171 864 aaKnown RBP16.74■□□□□ 0.27
LTBP3-216ENST00000530426 CDK11BP21127 795 aaKnown RBP16.74■□□□□ 0.27
LTBP3-216ENST00000530426 PSMC2P35998 433 aaKnown RBP16.74■□□□□ 0.27
LTBP3-216ENST00000530426 ACOT2P49753 483 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 HSP90AA2PQ14568 343 aaPredicted RBP16.74■□□□□ 0.27
LTBP3-216ENST00000530426 FILIP1Q7Z7B0 1213 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 FAM114A1Q8IWE2 563 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 RPUSD2Q8IZ73 545 aaKnown RBP16.74■□□□□ 0.27
LTBP3-216ENST00000530426 BADQ92934 168 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 FTHL17Q9BXU8 183 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 THAP9Q9H5L6 903 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 KIAA1586Q9HCI6 787 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 SAMSN1Q9NSI8 373 aaKnown RBP16.74■□□□□ 0.27
LTBP3-216ENST00000530426 DMAC2Q9NW81 257 aa16.74■□□□□ 0.27
LTBP3-216ENST00000530426 ZNF233A6NK53 670 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 ABLIM1O14639 778 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 CXCL10P02778 98 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 CASP4P49662 377 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 DSC3Q14574 896 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 NCAPHQ15003 741 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 ZBTB41Q5SVQ8 909 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 UBXN11Q5T124 520 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 CNKSR3Q6P9H4 555 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 FAM186BQ8IYM0 893 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 HACE1Q8IYU2 909 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 RNF169Q8NCN4 708 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 ZSWIM2Q8NEG5 633 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 FAM212AQ96EL1 285 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 LBHD1Q9BQE6 289 aaPredicted RBP16.73■□□□□ 0.27
LTBP3-216ENST00000530426 CCDC94Q9BW85 323 aaPredicted RBP16.73■□□□□ 0.27
LTBP3-216ENST00000530426 FAM105AQ9NUU6 356 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 PARP2Q9UGN5 583 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 PCDHB2Q9Y5E7 798 aa16.73■□□□□ 0.27
LTBP3-216ENST00000530426 SCN5AQ14524 2016 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 AKAP3O75969 853 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 GNA14O95837 355 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 STAG3L1P0CL83 205 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 ACRP10323 421 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 SKIP12755 728 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 KRT13P13646 458 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 TNFSF9P41273 254 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 MTIF2P46199 727 aaKnown RBP16.72■□□□□ 0.27
LTBP3-216ENST00000530426 FPGSQ05932 587 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 PPIGQ13427 754 aaKnown RBP eCLIP16.72■□□□□ 0.271e-8■■□□□ 13.6
LTBP3-216ENST00000530426 IKBKEQ14164 716 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 SNRNP35Q16560 246 aaKnown RBP16.72■□□□□ 0.27
LTBP3-216ENST00000530426 KYAT1Q16773 422 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 CBWD2Q8IUF1 395 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
LTBP3-216ENST00000530426 CEP120Q8N960 986 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 ANKRD20A12PQ8NF67 263 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 CNOT6LQ96LI5 555 aaKnown RBP16.72■□□□□ 0.27
LTBP3-216ENST00000530426 ACAP3Q96P50 834 aa16.72■□□□□ 0.27
LTBP3-216ENST00000530426 RPF1Q9H9Y2 349 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms