RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 TMEM60Q9H2L4 133 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 GPRC5CQ9NQ84 441 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 KLK14Q9P0G3 267 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 CACNG4Q9UBN1 327 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 STK39Q9UEW8 545 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 INPPL1O15357 1258 aa23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 SPATA31D3P0C874 917 aa23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 NCBP1Q09161 790 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 ST3GAL1Q11201 340 aa23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 SPATA31D4Q6ZUB0 917 aa23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 GLYCTKQ8IVS8 523 aa23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 RNF168Q8IYW5 571 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 ACSF2Q96CM8 615 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 MTMR9Q96QG7 549 aa23.03■■□□□ 1.28
TSPAN4-219ENST00000530404 MYH11P35749 1972 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 GALR2O43603 387 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 EFEMP2O95967 443 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 ADH1AP07327 375 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 GUCY1B3Q02153 619 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 PCBP1Q15365 356 aaKnown RBP eCLIP23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 KIAA0319Q5VV43 1072 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 OTOP3Q7RTS5 596 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 GSTCDQ8NEC7 633 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 MFSD1Q9H3U5 465 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 PARP2Q9UGN5 583 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 GIT1Q9Y2X7 761 aa23.02■■□□□ 1.28
TSPAN4-219ENST00000530404 CCDC195A0A1B0GUA6 201 aa23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 LRRIQ4A6NIV6 560 aa23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 N4BP1O75113 896 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 RFPL2O75678 378 aa23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 GLUD1P00367 558 aa23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 NEK4P51957 841 aa23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 POU5F1BQ06416 359 aa23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 TRIM29Q14134 588 aa23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 GPR62Q9BZJ7 368 aa23.01■■□□□ 1.27
TSPAN4-219ENST00000530404 CITO14578 2027 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 MED24O75448 989 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 NEFLP07196 543 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 SPATA31C1P0DKV0 1188 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 MCM7P33993 719 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 DSG1Q02413 1049 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 ASTLQ6HA08 431 aaPredicted RBP23■■□□□ 1.27
TSPAN4-219ENST00000530404 FUT10Q6P4F1 479 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 SLC27A1Q6PCB7 646 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 C15orf39Q6ZRI6 1047 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 PALB2Q86YC2 1186 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 FLCNQ8NFG4 579 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 COLEC11Q9BWP8 271 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 NFKBIZQ9BYH8 718 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 KCNK12Q9HB15 430 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 RXFP1Q9HBX9 757 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 SSX2IPQ9Y2D8 614 aa23■■□□□ 1.27
TSPAN4-219ENST00000530404 WDR87Q6ZQQ6 2873 aa22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 TTLL13PA6NNM8 815 aa22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 GFRA3O60609 400 aa22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 RPL17P18621 184 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 CWF19L1Q69YN2 538 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 HACE1Q8IYU2 909 aa22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 RSAD2Q8WXG1 361 aa22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 PAAF1Q9BRP4 392 aa22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 USP20Q9Y2K6 914 aa22.99■■□□□ 1.27
TSPAN4-219ENST00000530404 NARSO43776 548 aaKnown RBP22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 NR1I2O75469 434 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 GBP2P32456 591 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 TDGQ13569 410 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 CATSPER3Q86XQ3 398 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 CMASQ8NFW8 434 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 HASPINQ8TF76 798 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 CXCL16Q9H2A7 254 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 CHST7Q9NS84 486 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 ADAM28Q9UKQ2 775 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 DUSP12Q9UNI6 340 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 MIA3Q5JRA6 1907 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 NOTCH4Q99466 2003 aa22.98■■□□□ 1.27
TSPAN4-219ENST00000530404 A0A1B0GUA9 196 aa22.97■■□□□ 1.27
TSPAN4-219ENST00000530404 GRIK3Q13003 919 aa22.97■■□□□ 1.27
TSPAN4-219ENST00000530404 POTEGQ6S5H5 508 aa22.97■■□□□ 1.27
TSPAN4-219ENST00000530404 RIN2Q8WYP3 895 aaPredicted RBP22.97■■□□□ 1.27
TSPAN4-219ENST00000530404 BSNDQ8WZ55 320 aa22.97■■□□□ 1.27
TSPAN4-219ENST00000530404 SMG7Q92540 1137 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-219ENST00000530404 WDR6Q9NNW5 1121 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-219ENST00000530404 CLUHO75153 1309 aa22.97■■□□□ 1.27
TSPAN4-219ENST00000530404 TGM5O43548 720 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 PI15O43692 258 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 LIG1P18858 919 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 USP41Q3LFD5 358 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 PRSS55Q6UWB4 352 aaPredicted RBP22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 ZNF707Q96C28 371 aaPredicted RBP22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 MYADMQ96S97 322 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 IRF2BPLQ9H1B7 796 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 POLD4Q9HCU8 107 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 TUFT1Q9NNX1 390 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 SNTG2Q9NY99 539 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 FBXL21Q9UKT6 434 aa22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 PDCD11Q14690 1871 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-219ENST00000530404 CASTOR2A6NHX0 329 aa22.95■■□□□ 1.26
TSPAN4-219ENST00000530404 ST18O60284 1047 aa22.95■■□□□ 1.26
TSPAN4-219ENST00000530404 SEC24BO95487 1268 aa22.95■■□□□ 1.26
TSPAN4-219ENST00000530404 EDN1P05305 212 aa22.95■■□□□ 1.26
TSPAN4-219ENST00000530404 XRCC6P12956 609 aaKnown RBP eCLIP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms