RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 MPP2Q14168 576 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 DACT2Q5SW24 774 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 C6orf118Q5T5N4 469 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 PRMT6Q96LA8 375 aaPredicted RBP15.24■□□□□ 0.03
USP48-213ENST00000529637 CTNNAL1Q9UBT7 734 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 ANKRD33BA6NCL7 494 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 RASGRF2O14827 1237 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 IRF6O14896 467 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 CHRNA5P30532 468 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
USP48-213ENST00000529637 ODR4Q5SWX8 454 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 CGB2Q6NT52 195 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 TTC27Q6P3X3 843 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 CCDC25Q86WR0 208 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 OLIG1Q8TAK6 271 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 ARHGEF26Q96DR7 871 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 MBOAT7Q96N66 472 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 NSRP1Q9H0G5 558 aaKnown RBP15.24■□□□□ 0.03
USP48-213ENST00000529637 PARVGQ9HBI0 331 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.24■□□□□ 0.03
USP48-213ENST00000529637 ZBTB21Q9ULJ3 1066 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 TMEM120BA0PK00 339 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 RIPK2O43353 540 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 PDHA1P08559 390 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 PSMC2P35998 433 aaKnown RBP15.24■□□□□ 0.03
USP48-213ENST00000529637 ZNF131P52739 623 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 EPHA7Q15375 998 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 TBC1D10BQ4KMP7 808 aaPredicted RBP15.24■□□□□ 0.03
USP48-213ENST00000529637 ANO7Q6IWH7 933 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 SEPT14Q6ZU15 432 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 DDX23Q9BUQ8 820 aaKnown RBP15.24■□□□□ 0.03
USP48-213ENST00000529637 CHORDC1Q9UHD1 332 aaPredicted RBP15.24■□□□□ 0.03
USP48-213ENST00000529637 VAV3Q9UKW4 847 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
USP48-213ENST00000529637 H0YIN7 160 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 LRRN2O75325 713 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 MARCKSL1P49006 195 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 MAPK7Q13164 816 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 SLMAPQ14BN4 828 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 LLGL1Q15334 1064 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 GMCL1Q96IK5 515 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 IDI2Q9BXS1 227 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 SIX2Q9NPC8 291 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 ETAA1Q9NY74 926 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 EXOC3O60645 756 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 SUN1O94901 812 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 POLR2MP0CAP2 368 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 PTGIRP43119 386 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
USP48-213ENST00000529637 TNFAIP8L3Q5GJ75 292 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 SPDYCQ5MJ68 293 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 FAM43BQ6ZT52 329 aaPredicted RBP15.23■□□□□ 0.03
USP48-213ENST00000529637 HOMER3Q9NSC5 361 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 TAS2R14Q9NYV8 317 aa15.23■□□□□ 0.03
USP48-213ENST00000529637 SNUPNO95149 360 aaKnown RBP15.22■□□□□ 0.03
USP48-213ENST00000529637 GM2AP17900 193 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 VSTM1Q6UX27 236 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 PALB2Q86YC2 1186 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 SYCE1Q8N0S2 351 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 WDR18Q9BV38 432 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 ETNK1Q9HBU6 452 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 COG5Q9UP83 839 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 PTPN22Q9Y2R2 807 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 LY75O60449 1722 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 SMCHD1A6NHR9 2005 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 TGFB1I1O43294 461 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 PECAM1P16284 738 aaPredicted RBP15.22■□□□□ 0.03
USP48-213ENST00000529637 GAP43P17677 238 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 PRKCIP41743 596 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 ATP11AP98196 1134 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 TNIP1Q15025 636 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 EPM2AIP1Q7L775 607 aaPredicted RBP15.22■□□□□ 0.03
USP48-213ENST00000529637 SPATA21Q7Z572 469 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 GMCL1P1Q8NEA9 526 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 CRYGNQ8WXF5 182 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 TMEM237Q96Q45 408 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 POP1Q99575 1024 aaKnown RBP15.22■□□□□ 0.03
USP48-213ENST00000529637 SH2D3AQ9BRG2 576 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 ZNF577Q9BSK1 485 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 ZCWPW1Q9H0M4 648 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 KCNK9Q9NPC2 374 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 DNAJC12Q9UKB3 198 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 TTC7AQ9ULT0 858 aaPredicted RBP15.22■□□□□ 0.03
USP48-213ENST00000529637 TCRBV7S2A1N4TA0A589 114 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 ARHGEF35A5YM69 484 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 ACSL3O95573 720 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 RAB27AP51159 221 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 LACTBP83111 547 aaPredicted RBP15.22■□□□□ 0.03
USP48-213ENST00000529637 DRAP1Q14919 205 aaPredicted RBP15.22■□□□□ 0.03
USP48-213ENST00000529637 PRELID2Q8N945 189 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 KRT35Q92764 455 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 POLR3CQ9BUI4 534 aaPredicted RBP15.22■□□□□ 0.03
USP48-213ENST00000529637 PCIF1Q9H4Z3 704 aa15.22■□□□□ 0.03
USP48-213ENST00000529637 PFASO15067 1338 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 SLITRK3O94933 977 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 GJB6O95452 261 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 APBA3O96018 575 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 KCNJ1P48048 391 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms