RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, human

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-233	ENST00000529552	NCL	P19338	710 aa	Known RBP	10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	AXL	P30530	894 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	YWHAB	P31946	246 aa	Known RBP	10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	NBL1	P41271	181 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	OR1G1	P47890	313 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	GLUD2	P49448	558 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	AK2	P54819	239 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	LAMTOR4	Q0VGL1	99 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	TDG	Q13569	410 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	TFDP1	Q14186	410 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	MXD4	Q14582	209 aa	Predicted RBP	10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	XKR9	Q5GH70	373 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	NCAPH2	Q6IBW4	605 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	PPP4R3A	Q6IN85	833 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	NOTUM	Q6P988	496 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	CYP26C1	Q6V0L0	522 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	AGMO	Q6ZNB7	445 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	MRPL10	Q7Z7H8	261 aa	Known RBP	10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	PACS2	Q86VP3	889 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	C4orf19	Q8IY42	314 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	SLFN12	Q8IYM2	578 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	TTC13	Q8NBP0	860 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	RNF149	Q8NC42	400 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	CCDC51	Q96ER9	411 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	SNX27	Q96L92	541 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	AIFM3	Q96NN9	605 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	VN1R3	Q9BXE9	311 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	TRIM6	Q9C030	488 aa	Predicted RBP	10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	SMOC2	Q9H3U7	446 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	DHX33	Q9H6R0	707 aa	Known RBP	10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	ZSWIM4	Q9H7M6	989 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	KCNMB3	Q9NPA1	279 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	MAN1C1	Q9NR34	630 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	IGSF9	Q9P2J2	1179 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	DUSP12	Q9UNI6	340 aa		10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.19	□□□□□ -0.78
FGFR1-233	ENST00000529552	STK36	Q9NRP7	1315 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	INO80B-WBP1	J3KQ70	363 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	NRP1	O14786	923 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	GBP2	P32456	591 aa	Predicted RBP	10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	EPHA7	Q15375	998 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	NPY5R	Q15761	445 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	DMRTA1	Q5VZB9	504 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	PIK3AP1	Q6ZUJ8	805 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	FERMT3	Q86UX7	667 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	CMAS	Q8NFW8	434 aa	Predicted RBP	10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	WASF1	Q92558	559 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	NKD2	Q969F2	451 aa	Predicted RBP	10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	RPS6KC1	Q96S38	1066 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	RTP3	Q9BQQ7	232 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	PHF20	Q9BVI0	1012 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	TM6SF1	Q9BZW5	370 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	BRMS1	Q9HCU9	246 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	PDRG1	Q9NUG6	133 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	RABGEF1	Q9UJ41	708 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	KCNJ14	Q9UNX9	436 aa		10.18	□□□□□ -0.78
FGFR1-233	ENST00000529552	CLUH	O75153	1309 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	PRR23A	A6NEV1	266 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	INPPL1	O15357	1258 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	B4GALT3	O60512	393 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	AOC1	P19801	751 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	HOXA11	P31270	313 aa	Predicted RBP	10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	MLH1	P40692	756 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	CYP4A11	Q02928	519 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	CREM	Q03060	361 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	CTTN	Q14247	550 aa	Known RBP	10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	UBXN11	Q5T124	520 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	TPH2	Q8IWU9	490 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	COLGALT2	Q8IYK4	626 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	SIX5	Q8N196	739 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	DYDC2	Q96IM9	177 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	GAD1	Q99259	594 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	COLEC11	Q9BWP8	271 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	APOL6	Q9BWW8	343 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	CSRNP2	Q9H175	543 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	MINDY3	Q9H8M7	445 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	KCNK12	Q9HB15	430 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	PIDD1	Q9HB75	910 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	VPS9D1	Q9Y2B5	631 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	IPP	Q9Y573	584 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	DOCK8	Q8NF50	2099 aa		10.17	□□□□□ -0.78
FGFR1-233	ENST00000529552	CCDC195	A0A1B0GUA6	201 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	ARL5C	A6NH57	179 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	TEX28	O15482	410 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	TSPAN1	O60635	241 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	LILRB3	O75022	631 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	DGAT1	O75907	488 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	SCNN1G	P51170	649 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	AFF1	P51825	1210 aa	Known RBP	10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	PTEN	P60484	403 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	FOXK2	Q01167	660 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	CWF19L1	Q69YN2	538 aa	Known RBP	10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	PADI6	Q6TGC4	694 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	ASCL5	Q7RTU5	278 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	FRMD5	Q7Z6J6	570 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	CCDC105	Q8IYK2	499 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	SMG8	Q8ND04	991 aa	Known RBP	10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	HDAC7	Q8WUI4	952 aa		10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	SMG7	Q92540	1137 aa	Known RBP	10.16	□□□□□ -0.78
FGFR1-233	ENST00000529552	HAS1	Q92839	578 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms