RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 KLHL5Q96PQ7 755 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 RPS6KC1Q96S38 1066 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 ADPGKQ9BRR6 497 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 HERC2P3Q9BVR0 1158 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 VN1R3Q9BXE9 311 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 GPRC5CQ9NQ84 441 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 USTQ9Y2C2 406 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 HES2Q9Y543 173 aa15.69■□□□□ 0.1
CAPN1-212ENST00000527887 PHLPP2Q6ZVD8 1323 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 B4GALT5O43286 388 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 NPTXRO95502 500 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 EFEMP2O95967 443 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 SCNN1GP51170 649 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 CLCN4P51793 760 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 GRIK3Q13003 919 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 PRPF4BQ13523 1007 aaKnown RBP15.68■□□□□ 0.1
CAPN1-212ENST00000527887 RILPL1Q5EBL4 403 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 APBB1IPQ7Z5R6 666 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-212ENST00000527887 RNF168Q8IYW5 571 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-212ENST00000527887 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 DEPTORQ8TB45 409 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 AUTS2Q8WXX7 1259 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 FBXL18Q96ME1 805 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 ZFP42Q96MM3 310 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 NXF3Q9H4D5 531 aaKnown RBP15.68■□□□□ 0.1
CAPN1-212ENST00000527887 SFXN1Q9H9B4 322 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.68■□□□□ 0.1
CAPN1-212ENST00000527887 MARCH5Q9NX47 278 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 MIOSQ9NXC5 875 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 DNM3Q9UQ16 869 aa15.68■□□□□ 0.1
CAPN1-212ENST00000527887 PRG3Q9Y2Y8 225 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-212ENST00000527887 ADH1AP07327 375 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 CNPP09543 421 aaKnown RBP15.67■□□□□ 0.1
CAPN1-212ENST00000527887 EPCAMP16422 314 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 TOB1P50616 345 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-212ENST00000527887 SIGLEC14Q08ET2 396 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 PTPN21Q16825 1174 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 RARS2Q5T160 578 aaKnown RBP15.67■□□□□ 0.1
CAPN1-212ENST00000527887 KRT79Q5XKE5 535 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 DTHD1Q6ZMT9 781 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 C15orf39Q6ZRI6 1047 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 HFE2Q6ZVN8 426 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 GSTCDQ8NEC7 633 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 HDAC7Q8WUI4 952 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 APOL6Q9BWW8 343 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 APOL5Q9BWW9 433 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 RHOBTB2Q9BYZ6 727 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 RXFP1Q9HBX9 757 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 CHST7Q9NS84 486 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 PARP2Q9UGN5 583 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 KCNG1Q9UIX4 513 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 KIAA1024Q9UPX6 916 aa15.67■□□□□ 0.1
CAPN1-212ENST00000527887 TMEM221A6NGB7 291 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 M0R296 226 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 PRKCBP05771 671 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 AKAP5P24588 427 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 GLUD2P49448 558 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 DSG1Q02413 1049 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 CREMQ03060 361 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 TMEM132AQ24JP5 1023 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 DCAF4L1Q3SXM0 396 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 KIAA0319Q5VV43 1072 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 GPR149Q86SP6 731 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 UBALD2Q8IYN6 164 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 ZDHHC14Q8IZN3 488 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 CMASQ8NFW8 434 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-212ENST00000527887 SNX29Q8TEQ0 813 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 PRRX2Q99811 253 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 TIPINQ9BVW5 301 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 CCDC113Q9H0I3 377 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 POMKQ9H5K3 350 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 PDZD7Q9H5P4 517 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 C17orf75Q9HAS0 396 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.66■□□□□ 0.1
CAPN1-212ENST00000527887 DDX19AQ9NUU7 478 aaKnown RBP15.66■□□□□ 0.1
CAPN1-212ENST00000527887 PCDHB6Q9Y5E3 794 aa15.66■□□□□ 0.1
CAPN1-212ENST00000527887 SSBP05455 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
CAPN1-212ENST00000527887 TUSC3Q13454 348 aa15.65■□□□□ 0.1
CAPN1-212ENST00000527887 ECM1Q16610 540 aa15.65■□□□□ 0.1
CAPN1-212ENST00000527887 USP41Q3LFD5 358 aa15.65■□□□□ 0.1
CAPN1-212ENST00000527887 BSNDQ8WZ55 320 aa15.65■□□□□ 0.1
CAPN1-212ENST00000527887 PBXIP1Q96AQ6 731 aa15.65■□□□□ 0.1
CAPN1-212ENST00000527887 TMX3Q96JJ7 454 aa15.65■□□□□ 0.1
CAPN1-212ENST00000527887 FNIP2Q9P278 1114 aa15.65■□□□□ 0.1
CAPN1-212ENST00000527887 ADAM28Q9UKQ2 775 aa15.65■□□□□ 0.1
CAPN1-212ENST00000527887 ARID2Q68CP9 1835 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 K7ERI5 159 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 TEX28O15482 410 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 TADA2AO75478 443 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 GLUD1P00367 558 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 THP07101 528 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 NBR1Q14596 966 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 MCTP1Q6DN14 999 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 FUT10Q6P4F1 479 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 TAS1R1Q7RTX1 841 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 ZBTB33Q86T24 672 aa15.64■□□□□ 0.09
CAPN1-212ENST00000527887 CDR2LQ86X02 465 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-212ENST00000527887 C12orf76Q8N812 135 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms