RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ARSHQ5FYA8 562 aa29.01■■■□□ 2.23
TSPAN4-217ENST00000527644 ATF7IP2Q5U623 682 aa29.01■■■□□ 2.23
TSPAN4-217ENST00000527644 APBB1IPQ7Z5R6 666 aaPredicted RBP29.01■■■□□ 2.23
TSPAN4-217ENST00000527644 DDX53Q86TM3 631 aaKnown RBP29.01■■■□□ 2.23
TSPAN4-217ENST00000527644 EPSTI1Q96J88 318 aa29.01■■■□□ 2.23
TSPAN4-217ENST00000527644 MIOSQ9NXC5 875 aa29.01■■■□□ 2.23
TSPAN4-217ENST00000527644 STK39Q9UEW8 545 aa29.01■■■□□ 2.23
TSPAN4-217ENST00000527644 NCOR1O75376 2440 aa29.01■■■□□ 2.23
TSPAN4-217ENST00000527644 LINC01565O15544 149 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 SMTNP53814 917 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 SMC1AQ14683 1233 aaKnown RBP29■■■□□ 2.23
TSPAN4-217ENST00000527644 DUSP6Q16828 381 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 DCAF4L1Q3SXM0 396 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 EEF1DP3Q658K8 133 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 PTCRAQ6ISU1 281 aaPredicted RBP29■■■□□ 2.23
TSPAN4-217ENST00000527644 COLGALT2Q8IYK4 626 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 GSTCDQ8NEC7 633 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 LRRC15Q8TF66 581 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 RAD54LQ92698 747 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 CCDC39Q9UFE4 941 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 TNFSF13BQ9Y275 285 aa29■■■□□ 2.23
TSPAN4-217ENST00000527644 NRP1O14786 923 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 PER2O15055 1255 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 SLC16A4O15374 487 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 NASPP49321 788 aaPredicted RBP28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 DLX2Q07687 328 aaPredicted RBP28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 DSC1Q08554 894 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 SPECC1Q5M775 1068 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 USP49Q70CQ1 688 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 GPBP1Q86WP2 473 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 VPS52Q8N1B4 723 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 MRPL43Q8N983 215 aaKnown RBP28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 BCL7CQ8WUZ0 217 aaPredicted RBP28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 ZNF396Q96N95 335 aaPredicted RBP28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 CLIC6Q96NY7 704 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 MRPL4Q9BYD3 311 aaKnown RBP28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 KLK14Q9P0G3 267 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 LARSQ9P2J5 1176 aaKnown RBP28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 ODF2LQ9ULJ1 636 aa28.99■■■□□ 2.23
TSPAN4-217ENST00000527644 NPHP3-ACAD11A0A0J9YXS1 232 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 GRXCR2A6NFK2 248 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 HIDE1A8MVS5 230 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 TBX10O75333 385 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 DDIT3P35638 169 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 NDUFV1P49821 464 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 DHX8Q14562 1220 aaKnown RBP28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 MCM6Q14566 821 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 TAS1R3Q7RTX0 852 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 KRI1Q8N9T8 703 aaKnown RBP28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 ACO2Q99798 780 aaKnown RBP28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 SNTG2Q9NY99 539 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 FAM50BQ9Y247 325 aa28.98■■■□□ 2.23
TSPAN4-217ENST00000527644 NR1I2O75469 434 aa28.97■■■□□ 2.23
TSPAN4-217ENST00000527644 TXLNAP40222 546 aa28.97■■■□□ 2.23
TSPAN4-217ENST00000527644 GRIK3Q13003 919 aa28.97■■■□□ 2.23
TSPAN4-217ENST00000527644 TMEM161BQ8NDZ6 487 aa28.97■■■□□ 2.23
TSPAN4-217ENST00000527644 LARP4BQ92615 738 aaKnown RBP28.97■■■□□ 2.23
TSPAN4-217ENST00000527644 RPS6KC1Q96S38 1066 aa28.97■■■□□ 2.23
TSPAN4-217ENST00000527644 ZBP1Q9H171 429 aa28.97■■■□□ 2.23
TSPAN4-217ENST00000527644 C2orf71A6NGG8 1288 aa28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 CXCL14O95715 111 aa28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 ZSCAN22P10073 491 aaPredicted RBP28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 CTSAP10619 480 aa28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 OR1G1P47890 313 aa28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 CACNB1Q02641 598 aaPredicted RBP28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 STK38Q15208 465 aa28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 NECAB3Q96P71 396 aaPredicted RBP28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 REEP2Q9BRK0 252 aa28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 PTPRHQ9HD43 1115 aa28.96■■■□□ 2.23
TSPAN4-217ENST00000527644 MYH11P35749 1972 aa28.95■■■□□ 2.23
TSPAN4-217ENST00000527644 H0YCG3 227 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 TNFRSF10AO00220 468 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 RECQL4O94761 1208 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 GLP2RO95838 553 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 STRN3Q13033 797 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 GIT2Q14161 759 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 LINC00301Q8NCQ3 95 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 MSLNLQ96KJ4 702 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 TARS2Q9BW92 718 aaKnown RBP28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 CLEC1BQ9P126 229 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 STK17AQ9UEE5 414 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 CD207Q9UJ71 328 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 PRG3Q9Y2Y8 225 aaPredicted RBP28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 IRAK3Q9Y616 596 aa28.95■■■□□ 2.22
TSPAN4-217ENST00000527644 TDRD15B5MCY1 1934 aaKnown RBP28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 KRT18P05783 430 aaKnown RBP28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 MAPTP10636 758 aaKnown RBP28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 IL9P15248 144 aa28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 RRAGBQ5VZM2 374 aa28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 SPRYD3Q8NCJ5 442 aa28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 COLEC11Q9BWP8 271 aa28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 VN1R3Q9BXE9 311 aa28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 BDP1A6H8Y1 2624 aa28.94■■■□□ 2.22
TSPAN4-217ENST00000527644 FAM13AO94988 1023 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 F13A1P00488 732 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 SRGAP2BP0DMP2 458 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 CA8P35219 290 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 ZNF131P52739 623 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 NCKAP1LP55160 1127 aa28.93■■■□□ 2.22
TSPAN4-217ENST00000527644 COASYQ13057 564 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms