RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 CA8P35219 290 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 OR1G1P47890 313 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 MCM2P49736 904 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 PRPF4BQ13523 1007 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 CUL4AQ13619 759 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 RILPL1Q5EBL4 403 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 RINT1Q6NUQ1 792 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 C1orf186Q6ZWK4 172 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 ZBTB8OSQ8IWT0 167 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 DEPTORQ8TB45 409 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 CASP10Q92851 521 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 RPGRIP1Q96KN7 1286 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 PRIMPOLQ96LW4 560 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 PLIN2Q99541 437 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 POP1Q99575 1024 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 TRIM6Q9C030 488 aaPredicted RBP11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 C2orf40Q9H1Z8 148 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 SNTG2Q9NY99 539 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 PARP2Q9UGN5 583 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 SMC3Q9UQE7 1217 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 CARNS1A5YM72 827 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 H3BQV1 296 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 PTGESO14684 152 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 HIP1RO75146 1068 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 HOXB8P17481 243 aaPredicted RBP11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 MAPK6Q16659 721 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 HERC4Q5GLZ8 1057 aaPredicted RBP11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 KIAA0319Q5VV43 1072 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 KRT79Q5XKE5 535 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 LARP1BQ659C4 914 aaKnown RBP11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 TAS1R3Q7RTX0 852 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 LRRC15Q8TF66 581 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 KIFAP3Q92845 792 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 B3GALT6Q96L58 329 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 PAAF1Q9BRP4 392 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 HERC2P3Q9BVR0 1158 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 RAB34Q9BZG1 259 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 GPR62Q9BZJ7 368 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 ADAM7Q9H2U9 754 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 DNM3Q9UQ16 869 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 KIF3AQ9Y496 699 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 STK24Q9Y6E0 443 aa11.52□□□□□ -0.57
PRPF40B-204ENST00000527253 TDRD15B5MCY1 1934 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 VWA3AA6NCI4 1184 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 SFI1A8K8P3 1242 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 N4BP3O15049 544 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 SOD2P04179 222 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 SRGAP2BP0DMP2 458 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 IGFBP6P24592 240 aaPredicted RBP11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 NPTX2P47972 431 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 CLCN4P51793 760 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 PEX3P56589 373 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 GRIN1Q05586 938 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 GIT2Q14161 759 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 PPP2R5AQ15172 486 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 ZRSR1Q15695 479 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 NAB2Q15742 525 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 HYIQ5T013 277 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 RARS2Q5T160 578 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 IFT74Q96LB3 600 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 POMKQ9H5K3 350 aa11.51□□□□□ -0.57
PRPF40B-204ENST00000527253 NPHP3-ACAD11A0A0J9YXS1 232 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 PRR33A8MZF0 331 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 C2CD2LO14523 706 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 TEX28O15482 410 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 RECQL4O94761 1208 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 SP100P23497 879 aaPredicted RBP11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 KLRC2P26717 231 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 EFNA5P52803 228 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 GRIK3Q13003 919 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 BMS1Q14692 1282 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 TMEM119Q4V9L6 283 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 HACE1Q8IYU2 909 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 FBXL18Q96ME1 805 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 RPS6KC1Q96S38 1066 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 COLEC11Q9BWP8 271 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 RXFP1Q9HBX9 757 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 PTPRHQ9HD43 1115 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 CHST7Q9NS84 486 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 ARHGAP28Q9P2N2 729 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 ZMYM2Q9UBW7 1377 aa11.5□□□□□ -0.57
PRPF40B-204ENST00000527253 MUC6Q6W4X9 2439 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 MYO10Q9HD67 2058 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 CASTOR2A6NHX0 329 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 CCDC169A6NNP5 214 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 K7ERI5 159 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 ABLIM1O14639 778 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 SLC16A4O15374 487 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 MEFVO15553 781 aaPredicted RBP11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 MYBP10242 640 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 GLUD2P49448 558 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 SLC12A3P55017 1021 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 DSG1Q02413 1049 aa11.49□□□□□ -0.57
PRPF40B-204ENST00000527253 ITIH3Q06033 890 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms