RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 CTTNQ14247 550 aaKnown RBP17.93■□□□□ 0.46
PTPRU-210ENST00000527027 SPATA31D4Q6ZUB0 917 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 PALB2Q86YC2 1186 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 IFNLR1Q8IU57 520 aaPredicted RBP17.93■□□□□ 0.46
PTPRU-210ENST00000527027 GPR65Q8IYL9 337 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 ZNF707Q96C28 371 aaPredicted RBP17.93■□□□□ 0.46
PTPRU-210ENST00000527027 CPB2Q96IY4 423 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 XPNPEP1Q9NQW7 623 aa17.93■□□□□ 0.46
PTPRU-210ENST00000527027 F8W810 466 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 CDKL5O76039 1030 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 SLITRK3O94933 977 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 BAG4O95429 457 aaKnown RBP17.92■□□□□ 0.46
PTPRU-210ENST00000527027 SRFP11831 508 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 CYP4A11Q02928 519 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 SPIRE1Q08AE8 756 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 PIK3AP1Q6ZUJ8 805 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 TPH2Q8IWU9 490 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 SLFN12Q8IYM2 578 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 HACE1Q8IYU2 909 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 OXER1Q8TDS5 423 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 TRIM6Q9C030 488 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-210ENST00000527027 NT5C3AQ9H0P0 336 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 PIDD1Q9HB75 910 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTPRU-210ENST00000527027 ZDHHC7Q9NXF8 308 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.92■□□□□ 0.462e-6■□□□□ 9.3
PTPRU-210ENST00000527027 FNIP2Q9P278 1114 aa17.92■□□□□ 0.46
PTPRU-210ENST00000527027 EP300Q09472 2414 aaPredicted RBP17.92■□□□□ 0.46
PTPRU-210ENST00000527027 FRYLO94915 3013 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 TGM5O43548 720 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 LAMP2P13473 410 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 ARF4P18085 180 aaPredicted RBP17.91■□□□□ 0.46
PTPRU-210ENST00000527027 RFX1P22670 979 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 ID4P47928 161 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 AMHR2Q16671 573 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 USP41Q3LFD5 358 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 LILRA6Q6PI73 481 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 ERMP1Q7Z2K6 904 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 B3GALT6Q96L58 329 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 APOL6Q9BWW8 343 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 GPR62Q9BZJ7 368 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 PRKD2Q9BZL6 878 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 SEMA4AQ9H3S1 761 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 GJB4Q9NTQ9 266 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 PDRG1Q9NUG6 133 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 DCHS1Q96JQ0 3298 aa17.91■□□□□ 0.46
PTPRU-210ENST00000527027 LYPLA2O95372 231 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 AKAP5P24588 427 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 ARL2P36404 184 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 MBTD1Q05BQ5 628 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 SCRN1Q12765 414 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 PHLDB3Q6NSJ2 640 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 FUT10Q6P4F1 479 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 GSTCDQ8NEC7 633 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 ASAP3Q8TDY4 903 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 RIN2Q8WYP3 895 aaPredicted RBP17.9■□□□□ 0.46
PTPRU-210ENST00000527027 HSD17B14Q9BPX1 270 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 EIF2AK1Q9BQI3 630 aaKnown RBP17.9■□□□□ 0.46
PTPRU-210ENST00000527027 NFKBIZQ9BYH8 718 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 NXF3Q9H4D5 531 aaKnown RBP17.9■□□□□ 0.46
PTPRU-210ENST00000527027 TBC1D17Q9HA65 648 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 ANKEF1Q9NU02 776 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 ADAM28Q9UKQ2 775 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 CA14Q9ULX7 337 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 C2orf16Q68DN1 1984 aa17.9■□□□□ 0.46
PTPRU-210ENST00000527027 DGAT1O75907 488 aa17.89■□□□□ 0.45
PTPRU-210ENST00000527027 CAPSQ13938 189 aa17.89■□□□□ 0.45
PTPRU-210ENST00000527027 EARS2Q5JPH6 523 aaKnown RBP17.89■□□□□ 0.45
PTPRU-210ENST00000527027 SLC27A1Q6PCB7 646 aa17.89■□□□□ 0.45
PTPRU-210ENST00000527027 KCNG4Q8TDN1 519 aa17.89■□□□□ 0.45
PTPRU-210ENST00000527027 GPR152Q8TDT2 470 aa17.89■□□□□ 0.45
PTPRU-210ENST00000527027 PCDHA12Q9UN75 941 aa17.89■□□□□ 0.45
PTPRU-210ENST00000527027 STK36Q9NRP7 1315 aa17.89■□□□□ 0.45
PTPRU-210ENST00000527027 A0A1B0GUA9 196 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 ANHXE9PGG2 379 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 B4GALT5O43286 388 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 TADA2AO75478 443 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 LMNAP02545 664 aaKnown RBP17.88■□□□□ 0.45
PTPRU-210ENST00000527027 GLRA2P23416 452 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 CREMQ03060 361 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 GRIK3Q13003 919 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 POTEGQ6S5H5 508 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 GET4Q7L5D6 327 aaPredicted RBP17.88■□□□□ 0.45
PTPRU-210ENST00000527027 GLYCTKQ8IVS8 523 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 PARP2Q9UGN5 583 aa17.88■□□□□ 0.45
PTPRU-210ENST00000527027 DMXL1Q9Y485 3027 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 ZMYND10O75800 440 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 NPTXRO95502 500 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 RPL17P18621 184 aaKnown RBP17.87■□□□□ 0.45
PTPRU-210ENST00000527027 HTR4Q13639 388 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 CDR2LQ86X02 465 aaPredicted RBP17.87■□□□□ 0.45
PTPRU-210ENST00000527027 RABGGTAQ92696 567 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 ARHGEF3Q9NR81 526 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 SLC2A4RGQ9NR83 387 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 KLK14Q9P0G3 267 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 SIT1Q9Y3P8 196 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 ZFP37Q9Y6Q3 630 aaPredicted RBP17.87■□□□□ 0.45
PTPRU-210ENST00000527027 ZMYM2Q9UBW7 1377 aa17.87■□□□□ 0.45
PTPRU-210ENST00000527027 CACNA1AO00555 2505 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms