RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PPP3CAQ08209 521 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 GNASQ5JWF2 1037 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 TRIM65Q6PJ69 517 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 WDR59Q6PJI9 974 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 C17orf53Q8N3J3 647 aaPredicted RBP22.28■■□□□ 1.16
SMCO4-203ENST00000526869 FDXACB1Q9BRP7 624 aaPredicted RBP22.28■■□□□ 1.16
SMCO4-203ENST00000526869 INTS2Q9H0H0 1204 aaKnown RBP22.28■■□□□ 1.16
SMCO4-203ENST00000526869 TMEM8AQ9HCN3 771 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 PTPRHQ9HD43 1115 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 SIX2Q9NPC8 291 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 ANKFY1Q9P2R3 1169 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 TNFSF13BQ9Y275 285 aa22.28■■□□□ 1.16
SMCO4-203ENST00000526869 C17orf102A2RUQ5 167 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 MYADML2A6NDP7 307 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 LRRIQ3A6PVS8 624 aaPredicted RBP22.27■■□□□ 1.16
SMCO4-203ENST00000526869 ZSCAN12O43309 604 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 VTNP04004 478 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 UCHL3P15374 230 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 POLR2FP61218 127 aaKnown RBP22.27■■□□□ 1.16
SMCO4-203ENST00000526869 PCBP1Q15365 356 aaKnown RBP eCLIP22.27■■□□□ 1.16
SMCO4-203ENST00000526869 EPC2Q52LR7 807 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 ATF7IP2Q5U623 682 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 MPZL3Q6UWV2 235 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 RRAGAQ7L523 313 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 RAET1EQ8TD07 263 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 ZBTB45Q96K62 511 aaPredicted RBP22.27■■□□□ 1.16
SMCO4-203ENST00000526869 XPNPEP3Q9NQH7 507 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 COQ4Q9Y3A0 265 aa22.27■■□□□ 1.16
SMCO4-203ENST00000526869 SCN10AQ9Y5Y9 1956 aa22.27■■□□□ 1.15
SMCO4-203ENST00000526869 SOWAHDA6NJG2 315 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 LRRC53A6NM62 1247 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 OGTO15294 1046 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 CYP2C9P11712 490 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 CCND3P30281 292 aaPredicted RBP22.26■■□□□ 1.15
SMCO4-203ENST00000526869 MATR3P43243 847 aaKnown RBP eCLIP22.26■■□□□ 1.15
SMCO4-203ENST00000526869 NLRP11P59045 1033 aaKnown RBP22.26■■□□□ 1.15
SMCO4-203ENST00000526869 AMHR2Q16671 573 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 CRELD2Q6UXH1 353 aaPredicted RBP22.26■■□□□ 1.15
SMCO4-203ENST00000526869 RAD9BQ6WBX8 426 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 CCDC170Q8IYT3 715 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 C7orf31Q8N865 590 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 SLAIN1Q8ND83 568 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 EHBP1Q8NDI1 1231 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 KLHDC9Q8NEP7 349 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 NLRP7Q8WX94 980 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 VTI1AQ96AJ9 217 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 TMEM117Q9H0C3 514 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 ADAMTS10Q9H324 1103 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 MINDY3Q9H8M7 445 aa22.26■■□□□ 1.15
SMCO4-203ENST00000526869 GOLGA6L9A6NEM1 432 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 TTLL13PA6NNM8 815 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 FAM189A1O60320 539 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 GCLMP48507 274 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 POU5F1Q01860 360 aaKnown RBP22.25■■□□□ 1.15
SMCO4-203ENST00000526869 KRT39Q6A163 491 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 FMNL3Q8IVF7 1028 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 BRSK2Q8IWQ3 736 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 NME8Q8N427 588 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 LMO3Q8TAP4 145 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 CCDC127Q96BQ5 260 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 RBAKQ9NYW8 714 aaPredicted RBP22.25■■□□□ 1.15
SMCO4-203ENST00000526869 AIPL1Q9NZN9 384 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 PPP2R2CQ9Y2T4 447 aa22.25■■□□□ 1.15
SMCO4-203ENST00000526869 PGK1P00558 417 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 CCDC175P0C221 793 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 MCF2P10911 925 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 ACTN1P12814 892 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 SURF1Q15526 300 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 KYAT1Q16773 422 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 SFMBT2Q5VUG0 894 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 ZNF296Q8WUU4 475 aaPredicted RBP22.24■■□□□ 1.15
SMCO4-203ENST00000526869 PPP1R13BQ96KQ4 1090 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 SCLT1Q96NL6 688 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 TCHPQ9BT92 498 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 GCOM2Q9BZD3 368 aaPredicted RBP22.24■■□□□ 1.15
SMCO4-203ENST00000526869 NLRC4Q9NPP4 1024 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 HDAC6Q9UBN7 1215 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 APEX2Q9UBZ4 518 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 DDX20Q9UHI6 824 aaKnown RBP22.24■■□□□ 1.15
SMCO4-203ENST00000526869 FHOD1Q9Y613 1164 aa22.24■■□□□ 1.15
SMCO4-203ENST00000526869 B4GALT5O43286 388 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 GPR32O75388 356 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 RPLP2P05387 115 aaKnown RBP22.23■■□□□ 1.15
SMCO4-203ENST00000526869 IQCF3P0C7M6 154 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 CYLC1P35663 651 aaPredicted RBP22.23■■□□□ 1.15
SMCO4-203ENST00000526869 ACOT2P49753 483 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 AP3M2P53677 418 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 JAM2P57087 298 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 CHMP4BP1P59074 171 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 HTRA3P83110 453 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 HIC1Q14526 733 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 MTF1Q14872 753 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 ZNF568Q3ZCX4 644 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 CCSAPQ6IQ19 270 aaPredicted RBP22.23■■□□□ 1.15
SMCO4-203ENST00000526869 TAF2Q6P1X5 1199 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 RUFY4Q6ZNE9 571 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 C15orf39Q6ZRI6 1047 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 TOGARAM2Q6ZUX3 1019 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 SESTD1Q86VW0 696 aa22.23■■□□□ 1.15
SMCO4-203ENST00000526869 PCSK9Q8NBP7 692 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms