RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PTPRHQ9HD43 1115 aa15□□□□□ -0.01
CD44-224ENST00000526669 CHST12Q9NRB3 414 aa15□□□□□ -0.01
CD44-224ENST00000526669 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
CD44-224ENST00000526669 ANO10Q9NW15 660 aa15□□□□□ -0.01
CD44-224ENST00000526669 HES2Q9Y543 173 aa15□□□□□ -0.01
CD44-224ENST00000526669 SCN1AP35498 2009 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 TULP1O00294 542 aaPredicted RBP14.99□□□□□ -0.01
CD44-224ENST00000526669 ENPP3O14638 875 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 CLDN3O15551 220 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 CALUO43852 315 aaPredicted RBP14.99□□□□□ -0.01
CD44-224ENST00000526669 TOM1L1O75674 476 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 FGBP02675 491 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 PFKMP08237 780 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 ACTN1P12814 892 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 ADSSP30520 456 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 MLLT1Q03111 559 aaPredicted RBP14.99□□□□□ -0.01
CD44-224ENST00000526669 PAK1Q13153 545 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 DCAF4L1Q3SXM0 396 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 ANO6Q4KMQ2 910 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 ZBTB41Q5SVQ8 909 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 ANKRD40Q6AI12 368 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 PSRC1Q6PGN9 363 aaPredicted RBP14.99□□□□□ -0.01
CD44-224ENST00000526669 HS2ST1Q7LGA3 356 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 TMEM192Q8IY95 271 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 MLKLQ8NB16 471 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 CCDC51Q96ER9 411 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 TSG101Q99816 390 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 TSPYL2Q9H2G4 693 aaPredicted RBP14.99□□□□□ -0.01
CD44-224ENST00000526669 RGS18Q9NS28 235 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 FAM105AQ9NUU6 356 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 SNTG2Q9NY99 539 aa14.99□□□□□ -0.01
CD44-224ENST00000526669 MEIS3P2A8K0S8 358 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 C9IYK1 514 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 PDXKO00764 312 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 UPP2O95045 317 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 CCDC192P0DO97 292 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 TNFSF9P41273 254 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 DEFB103AP81534 67 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 MCL1Q07820 350 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 CENPPQ6IPU0 288 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 FAM117BQ6P1L5 589 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 TMCO2Q7Z6W1 182 aaPredicted RBP14.98□□□□□ -0.01
CD44-224ENST00000526669 ECHDC2Q86YB7 292 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 SMG8Q8ND04 991 aaKnown RBP14.98□□□□□ -0.01
CD44-224ENST00000526669 EEF2KMTQ96G04 330 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 DHTKD1Q96HY7 919 aaPredicted RBP14.98□□□□□ -0.01
CD44-224ENST00000526669 HSPBP1Q9NZL4 362 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 DACH1Q9UI36 760 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 AGO2Q9UKV8 859 aaKnown RBP14.98□□□□□ -0.01
CD44-224ENST00000526669 IPPQ9Y573 584 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 PCDHB2Q9Y5E7 798 aa14.98□□□□□ -0.01
CD44-224ENST00000526669 A0A0B4J269 797 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 OGTO15294 1046 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 NR3C1P04150 777 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 MCF2P10911 925 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 ATF7P17544 494 aaPredicted RBP14.97□□□□□ -0.01
CD44-224ENST00000526669 GARTP22102 1010 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 AKAP5P24588 427 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 PPP1R2P41236 205 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 KCNJ6P48051 423 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 ACOT2P49753 483 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 WDR5P61964 334 aaKnown RBP14.97□□□□□ -0.01
CD44-224ENST00000526669 ZCWPW2Q504Y3 356 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 C9orf50Q5SZB4 431 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 SLFN12LQ6IEE8 588 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 RDH13Q8NBN7 331 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 MED15Q96RN5 788 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 DUSP9Q99956 384 aaKnown RBP14.97□□□□□ -0.01
CD44-224ENST00000526669 UBE2OQ9C0C9 1292 aaKnown RBP14.97□□□□□ -0.01
CD44-224ENST00000526669 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 C1orf112Q9NSG2 853 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 RNF19AQ9NV58 838 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 CXXC1Q9P0U4 656 aaPredicted RBP14.97□□□□□ -0.01
CD44-224ENST00000526669 PARP2Q9UGN5 583 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 TRAF3IP3Q9Y228 551 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 STYXL1Q9Y6J8 313 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 COL4A6Q14031 1691 aa14.97□□□□□ -0.01
CD44-224ENST00000526669 ABHD14A-ACY1A0A1B0GW23 586 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 STAG3L1P0CL83 205 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 ITGA4P13612 1032 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 NR2F2P24468 414 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 CASP4P49662 377 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 GATMP50440 423 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 RAB27AP51159 221 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 CEP135Q66GS9 1140 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 TTI2Q6NXR4 508 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 SLC24A5Q71RS6 500 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 APBB1IPQ7Z5R6 666 aaPredicted RBP14.96□□□□□ -0.01
CD44-224ENST00000526669 GOLGA5Q8TBA6 731 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 FAM212AQ96EL1 285 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 FAM213AQ9BRX8 229 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 CXCL16Q9H2A7 254 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 KLK14Q9P0G3 267 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 LRFN2Q9ULH4 789 aa14.96□□□□□ -0.01
CD44-224ENST00000526669 A0A0U1RQF3 1178 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 BICDL2A1A5D9 508 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 FAM189A1O60320 539 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 EXOC3O60645 756 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 RECQL4O94761 1208 aa14.95□□□□□ -0.02
CD44-224ENST00000526669 BAIAP3O94812 1187 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms