RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 CAMK1Q14012 370 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 DCAF4L1Q3SXM0 396 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 ADALQ6DHV7 355 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 APBB1IPQ7Z5R6 666 aaPredicted RBP17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 FAM178BQ8IXR5 827 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 POF1BQ8WVV4 589 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 ZFP42Q96MM3 310 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 FAM193BQ96PV7 902 aaPredicted RBP17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 TCHPQ9BT92 498 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 GBP3Q9H0R5 595 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 CUEDC2Q9H467 287 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 SPG21Q9NZD8 308 aa17.81■□□□□ 0.44
SSSCA1-202ENST00000526433 PLXNA4Q9HCM2 1894 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 NT5C1B-RDH14C9J2C7 533 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 ZC3H11AO75152 810 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 GALTP07902 379 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 SCP2P22307 547 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 CMA1P23946 247 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 NMT1P30419 496 aaKnown RBP17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 MLH1P40692 756 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 PLCB3Q01970 1234 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 ZBTB33Q86T24 672 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 KCNN1Q92952 543 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 FIZ1Q96SL8 496 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 LRRC27Q9C0I9 530 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 KBTBD4Q9NVX7 518 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 DNAJB4Q9UDY4 337 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 KCNH3Q9ULD8 1083 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 TBX20Q9UMR3 447 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 GDAQ9Y2T3 454 aa17.8■□□□□ 0.44
SSSCA1-202ENST00000526433 PRUNE2Q8WUY3 3088 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 TDRD15B5MCY1 1934 aaKnown RBP17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 K7ENM7 598 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 B4GALT3O60512 393 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 ALDH2P05091 517 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 IDEP14735 1019 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 GAP43P17677 238 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 PROZP22891 400 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 PPM1AP35813 382 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 SCNN1GP51170 649 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 GTF2BQ00403 316 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 AMPD3Q01432 767 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 KRT17Q04695 432 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 UBE3AQ05086 875 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 SKIV2LQ15477 1246 aaKnown RBP17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 ZPBP2Q6X784 338 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 SFR1Q86XK3 245 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 SLC39A11Q8N1S5 342 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 GSTCDQ8NEC7 633 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 CDT1Q9H211 546 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 TNMDQ9H2S6 317 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 PRDM6Q9NQX0 595 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 PUF60Q9UHX1 559 aaKnown RBP17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 EYSQ5T1H1 3165 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 TRIP11Q15643 1979 aa17.79■□□□□ 0.44
SSSCA1-202ENST00000526433 REV3LO60673 3130 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 A0A1B0GVL5 298 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 ABLIM1O14639 778 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 TOM1L1O75674 476 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 RECQL4O94761 1208 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 CSPG5O95196 566 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 MCF2P10911 925 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 SLC11A1P49279 550 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 ZNF568Q3ZCX4 644 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 TIGD5Q53EQ6 642 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 ZC2HC1CQ53FD0 456 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 HERC4Q5GLZ8 1057 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 MPZL3Q6UWV2 235 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 ZNF720Q7Z2F6 126 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 SLC17A8Q8NDX2 589 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 BICD1Q96G01 975 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 PYM1Q9BRP8 204 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 TMEM175Q9BSA9 504 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 ST6GALNAC4Q9H4F1 302 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 NSUN3Q9H649 340 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 GDPD2Q9HCC8 539 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 PANK4Q9NVE7 773 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 SEL1LQ9UBV2 794 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 LZTS1Q9Y250 596 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 FAN1Q9Y2M0 1017 aa17.78■□□□□ 0.44
SSSCA1-202ENST00000526433 CARNS1A5YM72 827 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 ABCD1P33897 745 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 IRS1P35568 1242 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 GRM5P41594 1212 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 ERVFC1P60507 584 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 TPRNQ4KMQ1 711 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 TCEAL5Q5H9L2 206 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 COLGALT2Q8IYK4 626 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 CEP120Q8N960 986 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 MICAL1Q8TDZ2 1067 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 IGSF21Q96ID5 467 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 RPS6KC1Q96S38 1066 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 CXCL16Q9H2A7 254 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 MRPL44Q9H9J2 332 aaKnown RBP17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 TBC1D7Q9P0N9 293 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 SERTAD1Q9UHV2 236 aa17.77■□□□□ 0.44
SSSCA1-202ENST00000526433 BRWD1Q9NSI6 2320 aa17.77■□□□□ 0.43
SSSCA1-202ENST00000526433 ZMYM2Q9UBW7 1377 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms