RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PIGBQ92521 554 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 ADAM7Q9H2U9 754 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 OXSMQ9NWU1 459 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 ADAM29Q9UKF5 820 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 MAPRE3Q9UPY8 281 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 ZDHHC9Q9Y397 364 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 SPO11Q9Y5K1 396 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 KDM6AO15550 1401 aaPredicted RBP5.63□□□□□ -1.51
USP48-211ENST00000526044 LRRC37A3O60309 1634 aa5.63□□□□□ -1.51
USP48-211ENST00000526044 ZNF891A8MT65 544 aaPredicted RBP5.62□□□□□ -1.51
USP48-211ENST00000526044 GSG1L2A8MUP6 293 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 ELL2O00472 640 aaPredicted RBP5.62□□□□□ -1.51
USP48-211ENST00000526044 KCNQ3O43525 872 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 PDE8AO60658 829 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 CUTAO60888 179 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 INSRRP14616 1297 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 SLC9A1P19634 815 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 POLD1P28340 1107 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 IL13RA1P78552 427 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 EXOSC9Q06265 439 aaKnown RBP5.62□□□□□ -1.51
USP48-211ENST00000526044 SLC39A6Q13433 755 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 PUM1Q14671 1186 aaKnown RBP eCLIP5.62□□□□□ -1.51
USP48-211ENST00000526044 UBXN11Q5T124 520 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 ZNF790Q6PG37 636 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 LRSAM1Q6UWE0 723 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 UBE2Q2Q8WVN8 375 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 TSR2Q969E8 191 aaKnown RBP5.62□□□□□ -1.51
USP48-211ENST00000526044 FOXRED1Q96CU9 486 aaPredicted RBP5.62□□□□□ -1.51
USP48-211ENST00000526044 MBD6Q96DN6 1003 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 AJUBAQ96IF1 538 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 GPR20Q99678 358 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 OR10A5Q9H207 317 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.62□□□□□ -1.51
USP48-211ENST00000526044 FBXO10Q9UK96 956 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 ASAP1Q9ULH1 1129 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 DUSP10Q9Y6W6 482 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 SBF2Q86WG5 1849 aa5.62□□□□□ -1.51
USP48-211ENST00000526044 BCL9O00512 1426 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 RGS12O14924 1447 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 SIPA1L3O60292 1781 aaPredicted RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 CENPBP07199 599 aaPredicted RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 PTX3P26022 381 aaPredicted RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 CNR2P34972 360 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 EIF4A1P60842 406 aaKnown RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 ALDH6A1Q02252 535 aaKnown RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 CREB3L3Q68CJ9 461 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 PLEKHH3Q7Z736 793 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 RTN4RL1Q86UN2 441 aaPredicted RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 FERMT3Q86UX7 667 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 PASD1Q8IV76 773 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 REXO1L1PQ8IX06 675 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 KBTBD2Q8IY47 623 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 EFHBQ8N7U6 833 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 C8orf58Q8NAV2 365 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 OR2W6PQ8NHA6 318 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 CHTF18Q8WVB6 975 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 LEO1Q8WVC0 666 aaPredicted RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 C16orf92Q96LL3 132 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 ELF4Q99607 663 aaPredicted RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 FOXB1Q99853 325 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 BDH2Q9BUT1 245 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 KATNBL1Q9H079 304 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 THG1LQ9NWX6 298 aaKnown RBP5.61□□□□□ -1.51
USP48-211ENST00000526044 ADAMTS7Q9UKP4 1686 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 INVSQ9Y283 1065 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 MYRFQ9Y2G1 1151 aa5.61□□□□□ -1.51
USP48-211ENST00000526044 FANCIQ9NVI1 1328 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 PRICKLE3O43900 615 aaPredicted RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 B4GALT3O60512 393 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 SNRPA1P09661 255 aaKnown RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 HMGB2P26583 209 aaKnown RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 APEX1P27695 318 aaKnown RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 KPNA1P52294 538 aaPredicted RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 CD83Q01151 205 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 OCRLQ01968 901 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 ADCY1Q08828 1119 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 EFEMP1Q12805 493 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 TOP3AQ13472 1001 aaPredicted RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 EPHA7Q15375 998 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 SURF1Q15526 300 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 SEPT7Q16181 437 aaKnown RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 TWISTNBQ3B726 338 aaPredicted RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 KANK2Q63ZY3 851 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 PTF1AQ7RTS3 328 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 ZZZ3Q8IYH5 903 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 SMC1BQ8NDV3 1235 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 ZNF496Q96IT1 587 aaPredicted RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 SCYL1Q96KG9 808 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 TEX13AQ9BXU3 409 aaPredicted RBP5.6□□□□□ -1.51
USP48-211ENST00000526044 TOMM22Q9NS69 142 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 DOT1LQ8TEK3 1739 aa5.6□□□□□ -1.51
USP48-211ENST00000526044 SOS1Q07889 1333 aaPredicted RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 UBA6A0AVT1 1052 aaPredicted RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 PLSCR1O15162 318 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 B4GALT4O60513 344 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 CT47B1P0C2W7 299 aaPredicted RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 EIF2S2P20042 333 aaKnown RBP5.59□□□□□ -1.51
USP48-211ENST00000526044 ADCY8P40145 1251 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 MASP1P48740 699 aa5.59□□□□□ -1.51
USP48-211ENST00000526044 SLC6A3Q01959 620 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms