RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 CNPP09543 421 aaKnown RBP13.33□□□□□ -0.28
SSBP3-210ENST00000525990 SRGAP2BP0DMP2 458 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSBP3-210ENST00000525990 HAUS3Q68CZ6 603 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 DAW1Q8N136 415 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 CNNM3Q8NE01 707 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 RSPH1Q8WYR4 309 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 KLHL5Q96PQ7 755 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 KANSL3Q9P2N6 904 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 PARP2Q9UGN5 583 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 GIT1Q9Y2X7 761 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 TRIOO75962 3097 aa13.33□□□□□ -0.28
SSBP3-210ENST00000525990 PTGESO14684 152 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 HOXB8P17481 243 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-210ENST00000525990 IGFBP6P24592 240 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-210ENST00000525990 NAMPTP43490 491 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 NCBP1Q09161 790 aaKnown RBP13.32□□□□□ -0.28
SSBP3-210ENST00000525990 FAM187BQ17R55 369 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 TMC5Q6UXY8 1006 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 ZBTB8OSQ8IWT0 167 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 RNF168Q8IYW5 571 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-210ENST00000525990 HASPINQ8TF76 798 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 TBC1D32Q96NH3 1257 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 PLIN2Q99541 437 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 RUSC1Q9BVN2 902 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 HERC2P3Q9BVR0 1158 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 GPR62Q9BZJ7 368 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 ADAM7Q9H2U9 754 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 SMOC2Q9H3U7 446 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 UBN1Q9NPG3 1134 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 PRMT7Q9NVM4 692 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-210ENST00000525990 SNTG2Q9NY99 539 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 MYH15Q9Y2K3 1946 aa13.32□□□□□ -0.28
SSBP3-210ENST00000525990 C2CD4DB7Z1M9 353 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 RECQL4O94761 1208 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 SOD2P04179 222 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 CLCN4P51793 760 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 RAD51AP2Q09MP3 1159 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 MAPK7Q13164 816 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
SSBP3-210ENST00000525990 PDIA5Q14554 519 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 ZRSR1Q15695 479 aaKnown RBP13.31□□□□□ -0.28
SSBP3-210ENST00000525990 TPRNQ4KMQ1 711 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 NT5DC1Q5TFE4 455 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 GLYCTKQ8IVS8 523 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 CEP120Q8N960 986 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 DEPTORQ8TB45 409 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 EDAQ92838 391 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 PRIMPOLQ96LW4 560 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 HCN4Q9Y3Q4 1203 aa13.31□□□□□ -0.28
SSBP3-210ENST00000525990 DOCK8Q8NF50 2099 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 ANK1P16157 1881 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 CASTOR2A6NHX0 329 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 ACKR2O00590 384 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 N4BP3O15049 544 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 TEX28O15482 410 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 HIP1RO75146 1068 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 URODP06132 367 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 SPATA31D3P0C874 917 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 RPL17P18621 184 aaKnown RBP13.3□□□□□ -0.28
SSBP3-210ENST00000525990 MUTP22033 750 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 KLRC2P26717 231 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 PLA2G5P39877 138 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 PEX3P56589 373 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 ZXDAP98168 799 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
SSBP3-210ENST00000525990 GRIK3Q13003 919 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
SSBP3-210ENST00000525990 NAB2Q15742 525 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 MAPK6Q16659 721 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 KIAA0319Q5VV43 1072 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 FUT10Q6P4F1 479 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 SPATA31D4Q6ZUB0 917 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 CABP7Q86V35 215 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 TMEM87AQ8NBN3 555 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 LRRC15Q8TF66 581 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 FBXL18Q96ME1 805 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 PNMA5Q96PV4 448 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 RPS6KC1Q96S38 1066 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 C2orf40Q9H1Z8 148 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 MRPL17Q9NRX2 175 aaKnown RBP13.3□□□□□ -0.28
SSBP3-210ENST00000525990 GDAQ9Y2T3 454 aa13.3□□□□□ -0.28
SSBP3-210ENST00000525990 VWA3AA6NCI4 1184 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 SFI1A8K8P3 1242 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 KIF4AO95239 1232 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 ASGR2P07307 311 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 PRPHP41219 470 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 NPTX2P47972 431 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 GLUD2P49448 558 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 GRIN1Q05586 938 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 ITIH3Q06033 890 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 GIT2Q14161 759 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 GLRA4Q5JXX5 417 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 KRT79Q5XKE5 535 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 KIAA1841Q6NSI8 718 aa13.29□□□□□ -0.28
SSBP3-210ENST00000525990 CES5AQ6NT32 575 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms