RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 MRPL4Q9BYD3 311 aaKnown RBP19.28■□□□□ 0.68
NR1H3-228ENST00000525441 ARHGAP28Q9P2N2 729 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 CCDC39Q9UFE4 941 aa19.28■□□□□ 0.68
NR1H3-228ENST00000525441 FBXO2Q9UK22 296 aaPredicted RBP19.28■□□□□ 0.68
NR1H3-228ENST00000525441 MORC2Q9Y6X9 1032 aaPredicted RBP19.28■□□□□ 0.68
NR1H3-228ENST00000525441 TCF20Q9UGU0 1960 aaKnown RBP19.27■□□□□ 0.68
NR1H3-228ENST00000525441 GRXCR2A6NFK2 248 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 H0YCG3 227 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 PER2O15055 1255 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 LINC01565O15544 149 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 PLCG1P19174 1290 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 GRIK3Q13003 919 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 GIT2Q14161 759 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 NT5DC1Q5TFE4 455 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 GPBP1Q86WP2 473 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 TMEM173Q86WV6 379 aaPredicted RBP19.27■□□□□ 0.68
NR1H3-228ENST00000525441 MRPL43Q8N983 215 aaKnown RBP19.27■□□□□ 0.68
NR1H3-228ENST00000525441 TMEM87AQ8NBN3 555 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 RAD54LQ92698 747 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 ZNF396Q96N95 335 aaPredicted RBP19.27■□□□□ 0.68
NR1H3-228ENST00000525441 USP28Q96RU2 1077 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 NTPCRQ9BSD7 190 aaKnown RBP19.27■□□□□ 0.68
NR1H3-228ENST00000525441 LARSQ9P2J5 1176 aaKnown RBP19.27■□□□□ 0.68
NR1H3-228ENST00000525441 CD207Q9UJ71 328 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 ODF2LQ9ULJ1 636 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 TNFSF13BQ9Y275 285 aa19.27■□□□□ 0.68
NR1H3-228ENST00000525441 SFI1A8K8P3 1242 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 NRP1O14786 923 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 SLC16A4O15374 487 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 B4GALT3O60512 393 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 TBX10O75333 385 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 KRT18P05783 430 aaKnown RBP19.26■□□□□ 0.67
NR1H3-228ENST00000525441 CA8P35219 290 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 OR1G1P47890 313 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 DLX2Q07687 328 aaPredicted RBP19.26■□□□□ 0.67
NR1H3-228ENST00000525441 DSC1Q08554 894 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 STRN3Q13033 797 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 DHX8Q14562 1220 aaKnown RBP19.26■□□□□ 0.67
NR1H3-228ENST00000525441 SLC39A14Q15043 492 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 EEF1DP3Q658K8 133 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 COLGALT2Q8IYK4 626 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 NECAB3Q96P71 396 aaPredicted RBP19.26■□□□□ 0.67
NR1H3-228ENST00000525441 ZBP1Q9H171 429 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 BLOC1S4Q9NUP1 217 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 SNTG2Q9NY99 539 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 KLK14Q9P0G3 267 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 USP20Q9Y2K6 914 aa19.26■□□□□ 0.67
NR1H3-228ENST00000525441 C2orf71A6NGG8 1288 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 HIDE1A8MVS5 230 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 CXCL14O95715 111 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 EDN1P05305 212 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 CTSAP10619 480 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 SMAD4Q13485 552 aaKnown RBP19.25■□□□□ 0.67
NR1H3-228ENST00000525441 MCM6Q14566 821 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 STK38Q15208 465 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 KRI1Q8N9T8 703 aaKnown RBP19.25■□□□□ 0.67
NR1H3-228ENST00000525441 BCL7CQ8WUZ0 217 aaPredicted RBP19.25■□□□□ 0.67
NR1H3-228ENST00000525441 LARP4BQ92615 738 aaKnown RBP19.25■□□□□ 0.67
NR1H3-228ENST00000525441 EPSTI1Q96J88 318 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 ACO2Q99798 780 aaKnown RBP19.25■□□□□ 0.67
NR1H3-228ENST00000525441 COLEC11Q9BWP8 271 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 MIOSQ9NXC5 875 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 STK17AQ9UEE5 414 aa19.25■□□□□ 0.67
NR1H3-228ENST00000525441 PRG3Q9Y2Y8 225 aaPredicted RBP19.25■□□□□ 0.67
NR1H3-228ENST00000525441 NPHP3-ACAD11A0A0J9YXS1 232 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.24■□□□□ 0.67
NR1H3-228ENST00000525441 RECQL4O94761 1208 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 FAM13AO94988 1023 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 IL9P15248 144 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 SCP2P22307 547 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 DDIT3P35638 169 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 NASPP49321 788 aaPredicted RBP19.24■□□□□ 0.67
NR1H3-228ENST00000525441 CLUL1Q15846 466 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 ZNF568Q3ZCX4 644 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 ARSHQ5FYA8 562 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 SPECC1Q5M775 1068 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 TMEM161BQ8NDZ6 487 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 GSTCDQ8NEC7 633 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 MSLNLQ96KJ4 702 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 CLIC6Q96NY7 704 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 REEP2Q9BRK0 252 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 CLEC1BQ9P126 229 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 IRAK3Q9Y616 596 aa19.24■□□□□ 0.67
NR1H3-228ENST00000525441 VCANP13611 3396 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 TBCAO75347 108 aaKnown RBP19.23■□□□□ 0.67
NR1H3-228ENST00000525441 GLP2RO95838 553 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 ZSCAN22P10073 491 aaPredicted RBP19.23■□□□□ 0.67
NR1H3-228ENST00000525441 CACNB1Q02641 598 aaPredicted RBP19.23■□□□□ 0.67
NR1H3-228ENST00000525441 COASYQ13057 564 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 RRAGBQ5VZM2 374 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 TMEM184AQ6ZMB5 413 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 TAS1R3Q7RTX0 852 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 TCHPQ9BT92 498 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 CCDC94Q9BW85 323 aaPredicted RBP19.23■□□□□ 0.67
NR1H3-228ENST00000525441 TARS2Q9BW92 718 aaKnown RBP19.23■□□□□ 0.67
NR1H3-228ENST00000525441 PARVGQ9HBI0 331 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 BARX2Q9UMQ3 279 aaPredicted RBP19.23■□□□□ 0.67
NR1H3-228ENST00000525441 SSX2IPQ9Y2D8 614 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 GDAQ9Y2T3 454 aa19.23■□□□□ 0.67
NR1H3-228ENST00000525441 MBTPS2O43462 519 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms