RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 SPON1Q9HCB6 807 aa3.29□□□□□ -1.88
CD44-216ENST00000525293 VTA1Q9NP79 307 aa3.29□□□□□ -1.88
CD44-216ENST00000525293 EIF2B4Q9UI10 523 aaKnown RBP3.29□□□□□ -1.88
CD44-216ENST00000525293 RPTORQ8N122 1335 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 PRR5-ARHGAP8B1AHC4 643 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 LEFTY2O00292 366 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 BRINP1O60477 761 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 CLSTN1O94985 981 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 ADSLP30566 484 aaPredicted RBP3.28□□□□□ -1.88
CD44-216ENST00000525293 APOBEC3AP31941 199 aaPredicted RBP3.28□□□□□ -1.88
CD44-216ENST00000525293 TMPRSS15P98073 1019 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 STAT4Q14765 748 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 CSRP2Q16527 193 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 CRB2Q5IJ48 1285 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 GPRIN1Q7Z2K8 1008 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 ULK2Q8IYT8 1036 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 SYNE4Q8N205 404 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 AFAP1L2Q8N4X5 818 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 RIN2Q8WYP3 895 aaPredicted RBP3.28□□□□□ -1.88
CD44-216ENST00000525293 RAX2Q96IS3 184 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 TTPALQ9BTX7 342 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 QRSL1Q9H0R6 528 aaKnown RBP3.28□□□□□ -1.88
CD44-216ENST00000525293 KCNH6Q9H252 994 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 ZNF768Q9H5H4 540 aaKnown RBP3.28□□□□□ -1.88
CD44-216ENST00000525293 GPRC5DQ9NZD1 345 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 TRPM5Q9NZQ8 1165 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 FZD1Q9UP38 647 aa3.28□□□□□ -1.88
CD44-216ENST00000525293 TBKBP1A7MCY6 615 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 AHRRA9YTQ3 701 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 TRIM24O15164 1050 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 ADCY6O43306 1168 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 AKR1B10O60218 316 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 RAMP2O60895 175 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 EYA4O95677 639 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 GASTP01350 101 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 ITGB1P05556 798 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 CPEP16870 476 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 KRT4P19013 534 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 CNGA1P29973 690 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 PTPN7P35236 360 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 MRPS9P82933 396 aaKnown RBP3.27□□□□□ -1.89
CD44-216ENST00000525293 NHLH2Q02577 135 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 FSTL1Q12841 308 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 TIGD2Q4W5G0 525 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 TOR2AQ5JU69 321 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 PRAMEF14Q5SWL7 426 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 LAIR1Q6GTX8 287 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 Q6ZPA2 131 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 LHFPL2Q6ZUX7 228 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 PDZD4Q76G19 769 aaPredicted RBP3.27□□□□□ -1.89
CD44-216ENST00000525293 RHOUQ7L0Q8 258 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 MRGPRGQ86SM5 289 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 RPUSD2Q8IZ73 545 aaKnown RBP3.27□□□□□ -1.89
CD44-216ENST00000525293 PROKR1Q8TCW9 393 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 ZNF480Q8WV37 535 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 LMBR1Q8WVP7 490 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 AUTS2Q8WXX7 1259 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 TFAP2CQ92754 450 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 LENG9Q96B70 501 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 CEP95Q96GE4 821 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 PAWRQ96IZ0 340 aaKnown RBP3.27□□□□□ -1.89
CD44-216ENST00000525293 CCDC136Q96JN2 1154 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 PUS7Q96PZ0 661 aaKnown RBP3.27□□□□□ -1.89
CD44-216ENST00000525293 MLST8Q9BVC4 326 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 POGKQ9P215 609 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 C11orf21Q9P2W6 132 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 CLCA2Q9UQC9 943 aa3.27□□□□□ -1.89
CD44-216ENST00000525293 TMEM191CA6NGB0 347 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 B5MCH6 92 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 FOXN1O15353 648 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 PHF2O75151 1096 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 ABHD16AO95870 558 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 LAG3P18627 525 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 ZFP36P26651 326 aaKnown RBP3.26□□□□□ -1.89
CD44-216ENST00000525293 CRHR1P34998 444 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 RNASE9P60153 205 aaKnown RBP3.26□□□□□ -1.89
CD44-216ENST00000525293 FAM189BP81408 668 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 FAPQ12884 760 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 PTPAQ15257 358 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 BMT2Q1RMZ1 405 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 MUM1Q2TAK8 710 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 MFSD14BQ5SR56 506 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 LY6G5CQ5SRR4 150 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 EFCAB12Q6NXP0 572 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 KCNV1Q6PIU1 500 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 BTNL9Q6UXG8 535 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 KRT26Q7Z3Y9 468 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 GDF7Q7Z4P5 450 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 SYT12Q8IV01 421 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 VRK3Q8IV63 474 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 RNF169Q8NCN4 708 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 REPS2Q8NFH8 660 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 GPR156Q8NFN8 814 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 FBXO18Q8NFZ0 1043 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 OR10H5Q8NGA6 315 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 SLC35B2Q8TB61 432 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 WDR66Q8TBY9 1149 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 TSPEARQ8WU66 669 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 FATE1Q969F0 183 aa3.26□□□□□ -1.89
CD44-216ENST00000525293 AHCYL2Q96HN2 611 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms