RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 TMEM117Q9H0C3 514 aa12.63□□□□□ -0.39
CTTN-209ENST00000525276 FAM105AQ9NUU6 356 aa12.63□□□□□ -0.39
CTTN-209ENST00000525276 TYW1Q9NV66 732 aaKnown RBP12.63□□□□□ -0.39
CTTN-209ENST00000525276 PRMT7Q9NVM4 692 aaPredicted RBP12.63□□□□□ -0.39
CTTN-209ENST00000525276 KCND2Q9NZV8 630 aa12.63□□□□□ -0.39
CTTN-209ENST00000525276 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
CTTN-209ENST00000525276 TBKBP1A7MCY6 615 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 SPTLC2O15270 562 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
CTTN-209ENST00000525276 HIP1RO75146 1068 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 PPP6R2O75170 966 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 BRD1O95696 1058 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 FGFR1P11362 822 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 SP100P23497 879 aaPredicted RBP12.62□□□□□ -0.39
CTTN-209ENST00000525276 HOXA11P31270 313 aaPredicted RBP12.62□□□□□ -0.39
CTTN-209ENST00000525276 SLC12A3P55017 1021 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 AMHR2Q16671 573 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 FOXD4L6Q3SYB3 417 aaPredicted RBP12.62□□□□□ -0.39
CTTN-209ENST00000525276 SPECC1Q5M775 1068 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 ATL3Q6DD88 541 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 NOTUMQ6P988 496 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 FOXD4L3Q6VB84 417 aaPredicted RBP12.62□□□□□ -0.39
CTTN-209ENST00000525276 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
CTTN-209ENST00000525276 EPSTI1Q96J88 318 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 CLIC6Q96NY7 704 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 APOL5Q9BWW9 433 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 POLD4Q9HCU8 107 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 CCDC39Q9UFE4 941 aa12.62□□□□□ -0.39
CTTN-209ENST00000525276 CFAP47Q6ZTR5 3102 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 PRR23AA6NEV1 266 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 ZNF623O75123 536 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 PBX3P40426 434 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 NBL1P41271 181 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 EFNA5P52803 228 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 PLCB3Q01970 1234 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 DMP1Q13316 513 aaPredicted RBP12.61□□□□□ -0.39
CTTN-209ENST00000525276 MAPK6Q16659 721 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 FAM187BQ17R55 369 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 PLPP4Q5VZY2 271 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 USP49Q70CQ1 688 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 DAW1Q8N136 415 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 KREMEN2Q8NCW0 462 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 MICAL1Q8TDZ2 1067 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 RSPH1Q8WYR4 309 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 RAD54LQ92698 747 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 PGBD4Q96DM1 585 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 CPB2Q96IY4 423 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 PRIMPOLQ96LW4 560 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 CASD1Q96PB1 797 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 FZD8Q9H461 694 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 C17orf75Q9HAS0 396 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 STK17AQ9UEE5 414 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
CTTN-209ENST00000525276 CFAP45Q9UL16 551 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 LZTS1Q9Y250 596 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 PCDHB2Q9Y5E7 798 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 PCDHB12Q9Y5F1 795 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 NCOR2Q9Y618 2525 aa12.61□□□□□ -0.39
CTTN-209ENST00000525276 CCDC169A6NNP5 214 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 C2CD4DB7Z1M9 353 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 B4GALT5O43286 388 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 PRKCBP05771 671 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 ARF4P18085 180 aaPredicted RBP12.6□□□□□ -0.39
CTTN-209ENST00000525276 PEX3P56589 373 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 MAPK7Q13164 816 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 PRPF4BQ13523 1007 aaKnown RBP12.6□□□□□ -0.39
CTTN-209ENST00000525276 DHX8Q14562 1220 aaKnown RBP12.6□□□□□ -0.39
CTTN-209ENST00000525276 MCM6Q14566 821 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 TMEM132AQ24JP5 1023 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 CLLU1OSQ5K130 101 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 UBXN11Q5T124 520 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 SPOUT1Q5T280 376 aaKnown RBP12.6□□□□□ -0.39
CTTN-209ENST00000525276 RRAGBQ5VZM2 374 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 LLGL2Q6P1M3 1020 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 GLB1LQ6UWU2 654 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 THNSL1Q8IYQ7 743 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 LRRC43Q8N309 656 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 CNNM3Q8NE01 707 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 KCNG4Q8TDN1 519 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 MRPS27Q92552 414 aaKnown RBP12.6□□□□□ -0.39
CTTN-209ENST00000525276 LARP4BQ92615 738 aaKnown RBP12.6□□□□□ -0.39
CTTN-209ENST00000525276 KIFC3Q9BVG8 833 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 CCDC113Q9H0I3 377 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 POMKQ9H5K3 350 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 AAASQ9NRG9 546 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 PHLPP2Q6ZVD8 1323 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 CNTNAP2Q9UHC6 1331 aa12.6□□□□□ -0.39
CTTN-209ENST00000525276 DENND4AQ7Z401 1863 aa12.59□□□□□ -0.39
CTTN-209ENST00000525276 A0A1B0GUA9 196 aa12.59□□□□□ -0.39
CTTN-209ENST00000525276 ACKR2O00590 384 aa12.59□□□□□ -0.39
CTTN-209ENST00000525276 CUTAO60888 179 aa12.59□□□□□ -0.39
CTTN-209ENST00000525276 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
CTTN-209ENST00000525276 PLS3P13797 630 aa12.59□□□□□ -0.39
CTTN-209ENST00000525276 LIG1P18858 919 aa12.59□□□□□ -0.39
CTTN-209ENST00000525276 NCLP19338 710 aaKnown RBP12.59□□□□□ -0.39
CTTN-209ENST00000525276 DDIT3P35638 169 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms