RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SIK3Q9Y2K2 1263 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 IPPQ9Y573 584 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 ZMYM3Q14202 1370 aa5.79□□□□□ -1.48
CD44-215ENST00000525241 FAM171A2A8MVW0 826 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 WNT10BO00744 389 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 HTRA2O43464 458 aaPredicted RBP5.78□□□□□ -1.48
CD44-215ENST00000525241 S100BP04271 92 aaPredicted RBP5.78□□□□□ -1.48
CD44-215ENST00000525241 SREBF1P36956 1147 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 SLC16A1P53985 500 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 APBA1Q02410 837 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 EFEMP1Q12805 493 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 PIN1Q13526 163 aaPredicted RBP5.78□□□□□ -1.48
CD44-215ENST00000525241 PRAMEF14Q5SWL7 426 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 SPTY2D1Q68D10 685 aaPredicted RBP5.78□□□□□ -1.48
CD44-215ENST00000525241 TRMT2AQ8IZ69 625 aaKnown RBP5.78□□□□□ -1.48
CD44-215ENST00000525241 REPS2Q8NFH8 660 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 MDM1Q8TC05 714 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 ARL8AQ96BM9 186 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 CDC5LQ99459 802 aaKnown RBP5.78□□□□□ -1.48
CD44-215ENST00000525241 RTFDC1Q9BY42 306 aaPredicted RBP5.78□□□□□ -1.48
CD44-215ENST00000525241 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 IP6K2Q9UHH9 426 aa5.78□□□□□ -1.48
CD44-215ENST00000525241 ENDOD1O94919 500 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 ACO1P21399 889 aaKnown RBP5.77□□□□□ -1.49
CD44-215ENST00000525241 MAGEA10P43363 369 aaPredicted RBP5.77□□□□□ -1.49
CD44-215ENST00000525241 MFSD5Q6N075 450 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 PQLC1Q8N2U9 271 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 ZNF808Q8N4W9 903 aaPredicted RBP5.77□□□□□ -1.49
CD44-215ENST00000525241 CHST13Q8NET6 341 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 EDAQ92838 391 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 HSPBAP1Q96EW2 488 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 CEP95Q96GE4 821 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 PDCD2LQ9BRP1 358 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 RHOBTB2Q9BYZ6 727 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 DEF6Q9H4E7 631 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 HECAQ9UBI9 543 aaPredicted RBP5.77□□□□□ -1.49
CD44-215ENST00000525241 SAP30BPQ9UHR5 308 aaKnown RBP5.77□□□□□ -1.49
CD44-215ENST00000525241 GIT1Q9Y2X7 761 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 ATRNL1Q5VV63 1379 aa5.77□□□□□ -1.49
CD44-215ENST00000525241 E2F8A0AVK6 867 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 CCDC154A6NI56 674 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 GUCY1A2P33402 732 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 PTPN7P35236 360 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 PER3P56645 1201 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 R3HDM1Q15032 1099 aaKnown RBP5.76□□□□□ -1.49
CD44-215ENST00000525241 ELAVL1Q15717 326 aaKnown RBP5.76□□□□□ -1.49
CD44-215ENST00000525241 C3orf36Q3SXR2 165 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 MFSD14BQ5SR56 506 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 ZNF585AQ6P3V2 769 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 PDZD4Q76G19 769 aaPredicted RBP5.76□□□□□ -1.49
CD44-215ENST00000525241 ZNF572Q7Z3I7 529 aaPredicted RBP5.76□□□□□ -1.49
CD44-215ENST00000525241 ELOA2Q8IYF1 753 aaPredicted RBP5.76□□□□□ -1.49
CD44-215ENST00000525241 C7orf25Q9BPX7 421 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 KLC2Q9H0B6 622 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 CDH19Q9H159 772 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 KCNH6Q9H252 994 aa5.76□□□□□ -1.49
CD44-215ENST00000525241 AMY1AP04745 511 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 PF4V1P10720 104 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 ALOX15P16050 662 aaPredicted RBP5.75□□□□□ -1.49
CD44-215ENST00000525241 ZSCAN20P17040 1043 aaPredicted RBP5.75□□□□□ -1.49
CD44-215ENST00000525241 SELENOPP49908 381 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 HHEXQ03014 270 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 IL10RAQ13651 578 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 UAP1L1Q3KQV9 507 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 HS1BP3Q53T59 392 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 FAM47AQ5JRC9 791 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 APBB1IPQ7Z5R6 666 aaPredicted RBP5.75□□□□□ -1.49
CD44-215ENST00000525241 SGMS1Q86VZ5 419 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 MIER2Q8N344 545 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 MDGA1Q8NFP4 955 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 FBXO18Q8NFZ0 1043 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 JDP2Q8WYK2 163 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 HDAC10Q969S8 669 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 MIEF2Q96C03 454 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 CYFIP2Q96F07 1278 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 FAM89AQ96GI7 184 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 CAMKK2Q96RR4 588 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 ADOQ96SZ5 270 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 UHRF1Q96T88 793 aaPredicted RBP5.75□□□□□ -1.49
CD44-215ENST00000525241 LSM14BQ9BX40 385 aaKnown RBP5.75□□□□□ -1.49
CD44-215ENST00000525241 C1QTNF3Q9BXJ4 246 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 CSRNP2Q9H175 543 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 EPC1Q9H2F5 836 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 LDAHQ9H6V9 325 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 LANCL2Q9NS86 450 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 ZIM2Q9NZV7 527 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 ZNF180Q9UJW8 692 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 G3BP2Q9UN86 482 aaKnown RBP5.75□□□□□ -1.49
CD44-215ENST00000525241 ANKRD6Q9Y2G4 727 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 TCAF1Q9Y4C2 921 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 PCDHA13Q9Y5I0 950 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 EID1Q9Y6B2 187 aa5.75□□□□□ -1.49
CD44-215ENST00000525241 CAPN14A8MX76 684 aa5.74□□□□□ -1.49
CD44-215ENST00000525241 IL33O95760 270 aa5.74□□□□□ -1.49
CD44-215ENST00000525241 GNAT2P19087 354 aa5.74□□□□□ -1.49
CD44-215ENST00000525241 FLT3LGP49771 235 aa5.74□□□□□ -1.49
CD44-215ENST00000525241 ADAM17P78536 824 aa5.74□□□□□ -1.49
CD44-215ENST00000525241 ATP8B2P98198 1209 aa5.74□□□□□ -1.49
CD44-215ENST00000525241 SP140Q13342 867 aa5.74□□□□□ -1.49
CD44-215ENST00000525241 CDSNQ15517 529 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms