RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 OR1G1P47890 313 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 DMP1Q13316 513 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 MCM6Q14566 821 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 SMC1AQ14683 1233 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 ARSHQ5FYA8 562 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 ATF7IP2Q5U623 682 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 DDX53Q86TM3 631 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 VN1R2Q8NFZ6 395 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 EPSTI1Q96J88 318 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 CLIC6Q96NY7 704 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 USP28Q96RU2 1077 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 TMEM175Q9BSA9 504 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 VN1R3Q9BXE9 311 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 CXCL16Q9H2A7 254 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 NGRNQ9NPE2 291 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 CLEC1BQ9P126 229 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 FBXO2Q9UK22 296 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 BRWD1Q9NSI6 2320 aa14.15□□□□□ -0.14
TRAPPC4-205ENST00000525079 TDRD15B5MCY1 1934 aaKnown RBP14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 C2orf71A6NGG8 1288 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 F8W810 466 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 INPPL1O15357 1258 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 TAS1R3Q7RTX0 852 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 GPBP1Q86WP2 473 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 COLGALT2Q8IYK4 626 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 KCTD17Q8N5Z5 321 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 MRPL43Q8N983 215 aaKnown RBP14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 GSTCDQ8NEC7 633 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 RABGGTAQ92696 567 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 MSLNLQ96KJ4 702 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 ADPGKQ9BRR6 497 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZBP1Q9H171 429 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZSCAN16Q9H4T2 348 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 BLOC1S4Q9NUP1 217 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 CACNG4Q9UBN1 327 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 CD207Q9UJ71 328 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 GDAQ9Y2T3 454 aa14.14□□□□□ -0.15
TRAPPC4-205ENST00000525079 MBTPS2O43462 519 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 RECQL4O94761 1208 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 PLS3P13797 630 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 DSC1Q08554 894 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 PUS10Q3MIT2 529 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 TAS1R1Q7RTX1 841 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZBTB33Q86T24 672 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 FAM178BQ8IXR5 827 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 RAD54LQ92698 747 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 RPS6KC1Q96S38 1066 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 CDCA3Q99618 268 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 ACO2Q99798 780 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 TIPINQ9BVW5 301 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 TARS2Q9BW92 718 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 APOL5Q9BWW9 433 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 TMEM134Q9H6X4 195 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 CD320Q9NPF0 282 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 MARCH5Q9NX47 278 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 ARHGAP28Q9P2N2 729 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 TFIP11Q9UBB9 837 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 SRPRBQ9Y5M8 271 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 XIRP2A4UGR9 3374 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 PHLPP2Q6ZVD8 1323 aa14.13□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 CARNS1A5YM72 827 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 SLC26A4O43511 780 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 CLASP2O75122 1294 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 KRT18P05783 430 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 CTSAP10619 480 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 OSTNP61366 133 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 BMS1Q14692 1282 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 CEP120Q8N960 986 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 TMEM87AQ8NBN3 555 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZBTB45Q96K62 511 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 REEP2Q9BRK0 252 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 MRPL4Q9BYD3 311 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 PANK2Q9BZ23 570 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 CCSER1Q9C0I3 900 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 ZHX3Q9H4I2 956 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 C17orf75Q9HAS0 396 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 TNFSF13BQ9Y275 285 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 MYH11P35749 1972 aa14.12□□□□□ -0.15
TRAPPC4-205ENST00000525079 C2CD2LO14523 706 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 PTGESO14684 152 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 NR1I2O75469 434 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 HARSP12081 509 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 SSTR3P32745 418 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 SMTNP53814 917 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 GRIK3Q13003 919 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 SMAD4Q13485 552 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 GIT2Q14161 759 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 SLC39A14Q15043 492 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 STK38Q15208 465 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 DCAF4L1Q3SXM0 396 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 TMEM161BQ8NDZ6 487 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 SPIRE2Q8WWL2 714 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 PAAF1Q9BRP4 392 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 NTPCRQ9BSD7 190 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 TCHPQ9BT92 498 aa14.11□□□□□ -0.15
TRAPPC4-205ENST00000525079 COLEC11Q9BWP8 271 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms