RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 ADSSP30520 456 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 GCLMP48507 274 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 GPC3P51654 580 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 PTENP60484 403 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 IGBP1P78318 339 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 DRAP1Q14919 205 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-212ENST00000524330 SLC18A3Q16572 532 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 EPC2Q52LR7 807 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 IQCEQ6IPM2 695 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 SRGAP1Q7Z6B7 1085 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 TLK2Q86UE8 772 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 TRIM50Q86XT4 487 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 CBWD2Q8IUF1 395 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 UBE2Q2Q8WVN8 375 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 LMBR1Q8WVP7 490 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 NLRP4Q96MN2 994 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 ADPGKQ9BRR6 497 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 TARS2Q9BW92 718 aaKnown RBP10.8□□□□□ -0.68
VPS13B-212ENST00000524330 UBE2TQ9NPD8 197 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-212ENST00000524330 C1orf112Q9NSG2 853 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 RAB20Q9NX57 234 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 RBAKQ9NYW8 714 aaPredicted RBP10.8□□□□□ -0.68
VPS13B-212ENST00000524330 ANKFY1Q9P2R3 1169 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 TSKSQ9UJT2 592 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 INTUQ9ULD6 942 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 GUCA1BQ9UMX6 200 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 COQ4Q9Y3A0 265 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 ADGRA3Q8IWK6 1321 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 NRCAMQ92823 1304 aa10.8□□□□□ -0.68
VPS13B-212ENST00000524330 A0A0B4J269 797 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 ANO9A1A5B4 782 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 A6NJR5 290 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 FAM155AB1AL88 458 aaPredicted RBP10.79□□□□□ -0.68
VPS13B-212ENST00000524330 PJA2O43164 708 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 TOMM70O94826 608 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 ERLIN2O94905 339 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 CLSTN1O94985 981 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 IL18RAPO95256 599 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 ADRB2P07550 413 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 ACTN1P12814 892 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 TNFAIP3P21580 790 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 GTF2F1P35269 517 aaKnown RBP eCLIP10.79□□□□□ -0.68
VPS13B-212ENST00000524330 NAP1L1P55209 391 aaKnown RBP10.79□□□□□ -0.68
VPS13B-212ENST00000524330 JAM2P57087 298 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 BPIFB4P59827 614 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 YWHAEP62258 255 aaKnown RBP10.79□□□□□ -0.68
VPS13B-212ENST00000524330 MAP2K1Q02750 393 aaPredicted RBP10.79□□□□□ -0.68
VPS13B-212ENST00000524330 ARID5AQ03989 594 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 CRHR2Q13324 411 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 BIRC3Q13489 604 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 GRIK4Q16099 956 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 FAM187BQ17R55 369 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 CBWD6Q4V339 395 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 CBWD3Q5JTY5 395 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 CBWD5Q5RIA9 395 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 ATF7IP2Q5U623 682 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 PPP1R2P3Q6NXS1 205 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 MTHFD1LQ6UB35 978 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 MPZL3Q6UWV2 235 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 TSHZ1Q6ZSZ6 1077 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 IFNLR1Q8IU57 520 aaPredicted RBP10.79□□□□□ -0.68
VPS13B-212ENST00000524330 LRRC71Q8N4P6 559 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 CEP112Q8N8E3 955 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 DHX38Q92620 1227 aaKnown RBP10.79□□□□□ -0.68
VPS13B-212ENST00000524330 USP6NLQ92738 828 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 NOX5Q96PH1 765 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 CGRRF1Q99675 332 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 ACO2Q99798 780 aaKnown RBP10.79□□□□□ -0.68
VPS13B-212ENST00000524330 TMEM117Q9H0C3 514 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 SIX2Q9NPC8 291 aa10.79□□□□□ -0.68
VPS13B-212ENST00000524330 LRRIQ3A6PVS8 624 aaPredicted RBP10.78□□□□□ -0.68
VPS13B-212ENST00000524330 ZBTB42B2RXF5 422 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 TISP43B9A030 160 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 F8VZ95 297 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 H2AFZP0C0S5 128 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 TBXAS1P24557 533 aaPredicted RBP10.78□□□□□ -0.68
VPS13B-212ENST00000524330 PIK3CAP42336 1068 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 MCL1Q07820 350 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 PPP3CAQ08209 521 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 ARHGAP44Q17R89 818 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 ZNF568Q3ZCX4 644 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 HGSNATQ68CP4 663 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 SLC39A4Q6P5W5 647 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 H2AFVQ71UI9 128 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 TAS1R3Q7RTX0 852 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 WDR49Q8IV35 697 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 BRSK2Q8IWQ3 736 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 PPM1KQ8N3J5 372 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 NLRP7Q8WX94 980 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 C16orf70Q9BSU1 422 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 GCOM2Q9BZD3 368 aaPredicted RBP10.78□□□□□ -0.68
VPS13B-212ENST00000524330 CCDC113Q9H0I3 377 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 IKZF4Q9H2S9 585 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 FZD8Q9H461 694 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 RNPEPQ9H4A4 650 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 L2HGDHQ9H9P8 463 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 TNFSF13BQ9Y275 285 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 SIP14410 1827 aa10.78□□□□□ -0.68
VPS13B-212ENST00000524330 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms