RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SMARCA1P28370 1054 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 GNALP38405 381 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 PPP2CBP62714 309 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 PPP2CAP67775 309 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 ZNF267Q14586 743 aaPredicted RBP4.98□□□□□ -1.61
SKP1-212ENST00000523966 MST1LQ2TV78 715 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 C3orf36Q3SXR2 165 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 CCSAPQ6IQ19 270 aaPredicted RBP4.98□□□□□ -1.61
SKP1-212ENST00000523966 KSR2Q6VAB6 950 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 DENND1CQ8IV53 801 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 PRR18Q8N4B5 295 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 DIS3LQ8TF46 1054 aaKnown RBP4.98□□□□□ -1.61
SKP1-212ENST00000523966 KAT5Q92993 513 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 TTC17Q96AE7 1141 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 MBD6Q96DN6 1003 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 CLPTM1LQ96KA5 538 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 FAM193BQ96PV7 902 aaPredicted RBP4.98□□□□□ -1.61
SKP1-212ENST00000523966 MOCS1Q9NZB8 636 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 GABBR1Q9UBS5 961 aa4.98□□□□□ -1.61
SKP1-212ENST00000523966 ZNF536O15090 1300 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 A0A1W2PRX2 142 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 TEX33O43247 280 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 SLC26A4O43511 780 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 SGTAO43765 313 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 FTLP02792 175 aaPredicted RBP4.97□□□□□ -1.61
SKP1-212ENST00000523966 IL2RBP14784 551 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 BMP7P18075 431 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 CASRP41180 1078 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 CDC42EP1Q00587 391 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 APBA1Q02410 837 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 PTH1RQ03431 593 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 RNF151Q2KHN1 245 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 ZDHHC14Q8IZN3 488 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 C3orf20Q8ND61 904 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 GIMAP8Q8ND71 665 aaPredicted RBP4.97□□□□□ -1.61
SKP1-212ENST00000523966 SHCBP1Q8NEM2 672 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 RGMAQ96B86 450 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 TMX3Q96JJ7 454 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 TAAR9Q96RI9 348 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 LMF1Q96S06 567 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 TCF25Q9BQ70 676 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 SLC12A5Q9H2X9 1139 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 SEC61A2Q9H9S3 476 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 MSL2Q9HCI7 577 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 IL23AQ9NPF7 189 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 HDAC5Q9UQL6 1122 aa4.97□□□□□ -1.61
SKP1-212ENST00000523966 UBE2QL1A1L167 161 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 PMS2P1A4D2B8 440 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 H3BML4 177 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 CDC14BO60729 498 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 SYN1P17600 705 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 EDNRBP24530 442 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 CFPP27918 469 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 SREBF1P36956 1147 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 IL12RB1P42701 662 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 CREMQ03060 361 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 HGFACQ04756 655 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 HDAC1Q13547 482 aaPredicted RBP4.96□□□□□ -1.62
SKP1-212ENST00000523966 RAB39AQ14964 217 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 SEPT2Q15019 361 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 ACAP1Q15027 740 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 TBR1Q16650 682 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 B3GNT9Q6UX72 402 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 Q6ZVL8 140 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 DAAM2Q86T65 1068 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 ZBTB34Q8NCN2 500 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 OR2I1PQ8NGU4 316 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 MDM1Q8TC05 714 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 RUNDC1Q96C34 613 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 MTFMTQ96DP5 389 aaKnown RBP4.96□□□□□ -1.62
SKP1-212ENST00000523966 IL17RAQ96F46 866 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 NEIL1Q96FI4 390 aaPredicted RBP4.96□□□□□ -1.62
SKP1-212ENST00000523966 CDK5RAP3Q96JB5 506 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 LRRC37BQ96QE4 947 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 ACO2Q99798 780 aaKnown RBP4.96□□□□□ -1.62
SKP1-212ENST00000523966 NELFAQ9H3P2 528 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 TRPS1Q9UHF7 1281 aa4.96□□□□□ -1.62
SKP1-212ENST00000523966 MYBBP1AQ9BQG0 1328 aaKnown RBP4.96□□□□□ -1.62
SKP1-212ENST00000523966 LAMTOR5O43504 91 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 B4GALT3O60512 393 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 GPR32O75388 356 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 UBXN7O94888 489 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 NBPF7P0C2Y1 421 aaPredicted RBP4.95□□□□□ -1.62
SKP1-212ENST00000523966 ZSCAN22P10073 491 aaPredicted RBP4.95□□□□□ -1.62
SKP1-212ENST00000523966 RAP2AP10114 183 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 CR2P20023 1033 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 DDCP20711 480 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 HTR1BP28222 390 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 RPS19P39019 145 aaKnown RBP4.95□□□□□ -1.62
SKP1-212ENST00000523966 GZMKP49863 264 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 RIN1Q13671 783 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 GBX1Q14549 363 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 CCDC149Q6ZUS6 474 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 SRGAP1Q7Z6B7 1085 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 STON2Q8WXE9 905 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 FAM167AQ96KS9 214 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 CGRRF1Q99675 332 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 PDCD2LQ9BRP1 358 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 ZCCHC4Q9H5U6 513 aa4.95□□□□□ -1.62
SKP1-212ENST00000523966 LDAHQ9H6V9 325 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms