RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 PHYKPLQ8IUZ5 450 aa6.09□□□□□ -1.43
SREK1-213ENST00000523655 NEU4Q8WWR8 484 aaPredicted RBP6.09□□□□□ -1.43
SREK1-213ENST00000523655 TARS2Q9BW92 718 aaKnown RBP6.09□□□□□ -1.43
SREK1-213ENST00000523655 PCGF6Q9BYE7 350 aa6.09□□□□□ -1.43
SREK1-213ENST00000523655 HAPLN2Q9GZV7 340 aa6.09□□□□□ -1.43
SREK1-213ENST00000523655 ING3Q9NXR8 418 aa6.09□□□□□ -1.43
SREK1-213ENST00000523655 AGLP35573 1532 aa6.09□□□□□ -1.44
SREK1-213ENST00000523655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.09□□□□□ -1.44
SREK1-213ENST00000523655 NPHP4O75161 1426 aaPredicted RBP6.08□□□□□ -1.44
SREK1-213ENST00000523655 ZNF142P52746 1687 aaPredicted RBP6.08□□□□□ -1.44
SREK1-213ENST00000523655 MYO3AQ8NEV4 1616 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 GAS7O60861 476 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 OPHN1O60890 802 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 RPS6KA4O75676 772 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 EPHB1P54762 984 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 BCAR1P56945 870 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 SESN2P58004 480 aaPredicted RBP6.08□□□□□ -1.44
SREK1-213ENST00000523655 SMAD3P84022 425 aaKnown RBP6.08□□□□□ -1.44
SREK1-213ENST00000523655 KIAA1841Q6NSI8 718 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 TMPRSS6Q8IU80 811 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 MB21D1Q8N884 522 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 PIK3C3Q8NEB9 887 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 RPGRQ92834 1020 aaKnown RBP6.08□□□□□ -1.44
SREK1-213ENST00000523655 LPPQ93052 612 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 TCF25Q9BQ70 676 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 NOL10Q9BSC4 688 aaKnown RBP6.08□□□□□ -1.44
SREK1-213ENST00000523655 PITHD1Q9GZP4 211 aaPredicted RBP6.08□□□□□ -1.44
SREK1-213ENST00000523655 SPTLC3Q9NUV7 552 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 MCM8Q9UJA3 840 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 RCAN3Q9UKA8 241 aa6.08□□□□□ -1.44
SREK1-213ENST00000523655 WASHC2CQ9Y4E1 1318 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 CFAP74Q9C0B2 1584 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 GSG1L2A8MUP6 293 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 KIF3BO15066 747 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 PDE8AO60658 829 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 FAM20BO75063 409 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 ALDH1L1O75891 902 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 VSIG10L2P0DP72 767 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 RHBDL3P58872 404 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 ADCY1Q08828 1119 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 ABHD18Q0P651 414 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 TUBA3CQ13748 450 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 CCSAPQ6IQ19 270 aaPredicted RBP6.07□□□□□ -1.44
SREK1-213ENST00000523655 TIGD7Q6NT04 549 aaPredicted RBP6.07□□□□□ -1.44
SREK1-213ENST00000523655 TUBA3EQ6PEY2 450 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 ZNF627Q7L945 461 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 NME9Q86XW9 330 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 THEMISQ8N1K5 641 aaPredicted RBP6.07□□□□□ -1.44
SREK1-213ENST00000523655 TSR2Q969E8 191 aaKnown RBP6.07□□□□□ -1.44
SREK1-213ENST00000523655 MPHOSPH9Q99550 1183 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 ORAI3Q9BRQ5 295 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 MENTQ9BUN1 341 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 PRDM12Q9H4Q4 367 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 INTS7Q9NVH2 962 aaKnown RBP6.07□□□□□ -1.44
SREK1-213ENST00000523655 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.07□□□□□ -1.44
SREK1-213ENST00000523655 MSRAQ9UJ68 235 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 USP18Q9UMW8 372 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 MAPRE3Q9UPY8 281 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 REXO2Q9Y3B8 237 aaKnown RBP6.07□□□□□ -1.44
SREK1-213ENST00000523655 CDK13Q14004 1512 aaKnown RBP6.07□□□□□ -1.44
SREK1-213ENST00000523655 STRCP1A6NGW2 1772 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 A2ML1A8K2U0 1454 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 ROBO1Q9Y6N7 1651 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 KIF27Q86VH2 1401 aa6.07□□□□□ -1.44
SREK1-213ENST00000523655 MYPNQ86TC9 1320 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 DAPK3O43293 454 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 TSPAN6O43657 245 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 KIR2DL3P43628 341 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 CD69Q07108 199 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 TTF1Q15361 905 aaPredicted RBP6.06□□□□□ -1.44
SREK1-213ENST00000523655 CRB2Q5IJ48 1285 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 CT47A1Q5JQC4 288 aaPredicted RBP6.06□□□□□ -1.44
SREK1-213ENST00000523655 FKBP15Q5T1M5 1219 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 C1QL3Q5VWW1 255 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 AFAP1L2Q8N4X5 818 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 SMC1BQ8NDV3 1235 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 LARP4BQ92615 738 aaKnown RBP6.06□□□□□ -1.44
SREK1-213ENST00000523655 MIEF2Q96C03 454 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 CLIP3Q96DZ5 547 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 TRIM8Q9BZR9 551 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 MSL2Q9HCI7 577 aa6.06□□□□□ -1.44
SREK1-213ENST00000523655 DNMT1P26358 1616 aaKnown RBP6.06□□□□□ -1.44
SREK1-213ENST00000523655 GAAP10253 952 aa6.05□□□□□ -1.44
SREK1-213ENST00000523655 KPNA1P52294 538 aaPredicted RBP6.05□□□□□ -1.44
SREK1-213ENST00000523655 RABGGTBP53611 331 aa6.05□□□□□ -1.44
SREK1-213ENST00000523655 FAM50AQ14320 339 aaKnown RBP6.05□□□□□ -1.44
SREK1-213ENST00000523655 GSPT2Q8IYD1 628 aaKnown RBP6.05□□□□□ -1.44
SREK1-213ENST00000523655 EFHBQ8N7U6 833 aa6.05□□□□□ -1.44
SREK1-213ENST00000523655 UBR7Q8N806 425 aa6.05□□□□□ -1.44
SREK1-213ENST00000523655 ZNF512Q96ME7 567 aaPredicted RBP6.05□□□□□ -1.44
SREK1-213ENST00000523655 UIMC1Q96RL1 719 aa6.05□□□□□ -1.44
SREK1-213ENST00000523655 FDXACB1Q9BRP7 624 aaPredicted RBP6.05□□□□□ -1.44
SREK1-213ENST00000523655 GPR87Q9BY21 358 aa6.05□□□□□ -1.44
SREK1-213ENST00000523655 IKZF4Q9H2S9 585 aa6.05□□□□□ -1.44
SREK1-213ENST00000523655 ZNF703Q9H7S9 590 aaPredicted RBP6.05□□□□□ -1.44
SREK1-213ENST00000523655 POLR1AO95602 1720 aaPredicted RBP6.05□□□□□ -1.44
SREK1-213ENST00000523655 NHSL1Q5SYE7 1610 aa6.04□□□□□ -1.44
SREK1-213ENST00000523655 PRSS38A1L453 326 aa6.04□□□□□ -1.44
SREK1-213ENST00000523655 KLRG2A4D1S0 409 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms