RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 IQCB1Q15051 598 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 TMEM132AQ24JP5 1023 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 SPATA1Q5VX52 437 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 CNKSR3Q6P9H4 555 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 APBB1IPQ7Z5R6 666 aaPredicted RBP12.23□□□□□ -0.45
CDK16-221ENST00000523543 CDR2LQ86X02 465 aaPredicted RBP12.23□□□□□ -0.45
CDK16-221ENST00000523543 DHX40Q8IX18 779 aaKnown RBP12.23□□□□□ -0.45
CDK16-221ENST00000523543 CSGALNACT2Q8N6G5 542 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 CEP63Q96MT8 703 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 ADAM2Q99965 735 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 MSTO1Q9BUK6 570 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 EIF2AQ9BY44 585 aaKnown RBP12.23□□□□□ -0.45
CDK16-221ENST00000523543 CBX8Q9HC52 389 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 IL23AQ9NPF7 189 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 RGS18Q9NS28 235 aa12.23□□□□□ -0.45
CDK16-221ENST00000523543 AGO2Q9UKV8 859 aaKnown RBP12.23□□□□□ -0.45
CDK16-221ENST00000523543 C9IYK1 514 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 CETN3O15182 167 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 MAPK13O15264 365 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 SLC16A3O15427 465 aaKnown RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 EXTL3O43909 919 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 ZNF623O75123 536 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 NPTXRO95502 500 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 ZSCAN20P17040 1043 aaPredicted RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 RGS19P49795 217 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 RAB27AP51159 221 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 CYP2J2P51589 502 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 POU5F1Q01860 360 aaKnown RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 FPGSQ05932 587 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 ADAM9Q13443 819 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 HSP90AA2PQ14568 343 aaPredicted RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 KYAT1Q16773 422 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 TWF2Q6IBS0 349 aaKnown RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 DEFB128Q7Z7B8 93 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 ZBTB33Q86T24 672 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 RTN4RL1Q86UN2 441 aaPredicted RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 RPUSD2Q8IZ73 545 aaKnown RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 AOPEPQ8N6M6 819 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 XXYLT1Q8NBI6 393 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 ZSWIM2Q8NEG5 633 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 NOC3LQ8WTT2 800 aaKnown RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 DPF3Q92784 378 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 BADQ92934 168 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 TCHPQ9BT92 498 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 MKNK1Q9BUB5 465 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 PCIF1Q9H4Z3 704 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 KIAA1586Q9HCI6 787 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 FAM105AQ9NUU6 356 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 ZMYND8Q9ULU4 1186 aaPredicted RBP12.22□□□□□ -0.45
CDK16-221ENST00000523543 NFE2L3Q9Y4A8 694 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 NR2E3Q9Y5X4 410 aa12.22□□□□□ -0.45
CDK16-221ENST00000523543 A0A0U1RQF3 1178 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 AKAP3O75969 853 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 FGFR1OPO95684 399 aaKnown RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 LDHAP00338 332 aaKnown RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 CLTAP09496 248 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 HARSP12081 509 aaKnown RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 SKIP12755 728 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 ATF7P17544 494 aaPredicted RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 SYN1P17600 705 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 GRM5P41594 1212 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 MATR3P43243 847 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDK16-221ENST00000523543 CASP4P49662 377 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 FAM189BP81408 668 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 ZBTB41Q5SVQ8 909 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 CDKAL1Q5VV42 579 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 CRELD2Q6UXH1 353 aaPredicted RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 SLC24A5Q71RS6 500 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 MRPL10Q7Z7H8 261 aaKnown RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 GAS2L3Q86XJ1 694 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 IRF2BP1Q8IU81 584 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 GPD1LQ8N335 351 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 CEP120Q8N960 986 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 SMG8Q8ND04 991 aaKnown RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 SAAL1Q96ER3 474 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 EEF2KMTQ96G04 330 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 TRIM6Q9C030 488 aaPredicted RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 HSD3B7Q9H2F3 369 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 NXF3Q9H4D5 531 aaKnown RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 THAP9Q9H5L6 903 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 C1orf112Q9NSG2 853 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 CPSF3Q9UKF6 684 aaKnown RBP12.21□□□□□ -0.45
CDK16-221ENST00000523543 IPPQ9Y573 584 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 PCDHB2Q9Y5E7 798 aa12.21□□□□□ -0.45
CDK16-221ENST00000523543 RANBP2P49792 3224 aaKnown RBP12.2□□□□□ -0.46
CDK16-221ENST00000523543 ABHD14A-ACY1A0A1B0GW23 586 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.2□□□□□ -0.46
CDK16-221ENST00000523543 SMTNL1A8MU46 457 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 ENPP3O14638 875 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 EXOC3O60645 756 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 EFCAB14O75071 495 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 BAIAP3O94812 1187 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 ADRB2P07550 413 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 STAG3L1P0CL83 205 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 ZNF18P17022 549 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 PSMC2P35998 433 aaKnown RBP12.2□□□□□ -0.46
CDK16-221ENST00000523543 EPHB4P54760 987 aa12.2□□□□□ -0.46
CDK16-221ENST00000523543 MARSP56192 900 aaKnown RBP12.2□□□□□ -0.46
CDK16-221ENST00000523543 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms