RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 FAM86B2P0C5J1 330 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 RARGP13631 454 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 GTF2H1P32780 548 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 HSD17B4P51659 736 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 IRX1P78414 480 aaPredicted RBP11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 CACNB1Q02641 598 aaPredicted RBP11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 COL19A1Q14993 1142 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 ASIC2Q16515 512 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 OTOP1Q7RTM1 612 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 CCDC91Q7Z6B0 441 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 DENND1AQ8TEH3 1009 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 LMBR1Q8WVP7 490 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 SEC16BQ96JE7 1060 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 TRPV5Q9NQA5 729 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 USP40Q9NVE5 1235 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 SYNGAP1Q96PV0 1343 aa11.22□□□□□ -0.61
ERGIC1-211ENST00000523215 CHRNA3P32297 505 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 MAN1A1P33908 653 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 APLFQ8IW19 511 aaPredicted RBP11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 RHOT2Q8IXI1 618 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 DRAXINQ8NBI3 349 aaPredicted RBP11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 LSM14BQ9BX40 385 aaKnown RBP11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 FOXP3Q9BZS1 431 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 C17orf75Q9HAS0 396 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 SLC40A1Q9NP59 571 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 AVENQ9NQS1 362 aaPredicted RBP11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 STYXL1Q9Y6J8 313 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 SHTN1A0MZ66 631 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 ZNF24P17028 368 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 SCTRP47872 440 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 CREB5Q02930 508 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 KRT79Q5XKE5 535 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 CCHCR1Q8TD31 782 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 TBC1D5Q92609 795 aa11.21□□□□□ -0.61
ERGIC1-211ENST00000523215 EEF2P13639 858 aaKnown RBP11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 CACNB3P54284 484 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 TRAF1Q13077 416 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 PTK6Q13882 451 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 DOK7Q18PE1 504 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 PARP6Q2NL67 630 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 CCDC40Q4G0X9 1142 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 KIAA1755Q5JYT7 1200 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 TRMT10CQ7L0Y3 403 aaKnown RBP11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 ZNF720Q7Z2F6 126 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 DAW1Q8N136 415 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 PRELID2Q8N945 189 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 PLEKHG4BQ96PX9 1271 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 REEP2Q9BRK0 252 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 NTPCRQ9BSD7 190 aaKnown RBP11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 KLC4Q9NSK0 619 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 TRPC6Q9Y210 931 aa11.21□□□□□ -0.62
ERGIC1-211ENST00000523215 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 PODXLO00592 558 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 TBC1D12O60347 775 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 ECM2O94769 699 aaPredicted RBP11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 VIL1P09327 827 aaKnown RBP11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 GNAZP19086 355 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 INPP5BP32019 993 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 RTP1P59025 263 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 EAPPQ56P03 285 aaPredicted RBP11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 STON2Q8WXE9 905 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 IFT43Q96FT9 208 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 ZBED3Q96IU2 234 aaPredicted RBP11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 XPO6Q96QU8 1125 aaKnown RBP11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 PSTPIP2Q9H939 334 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 IFT122Q9HBG6 1241 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 RABGAP1Q9Y3P9 1069 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 SORBS3O60504 671 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 ZBED4O75132 1171 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 FLOT1O75955 427 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 GCAP28676 217 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 USP8P40818 1118 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 GTF2BQ00403 316 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 PDCLQ13371 301 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 AKT1S1Q96B36 256 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 SERPINB12Q96P63 405 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 HAUS2Q9NVX0 235 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 PCDHA12Q9UN75 941 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 TMEM98Q9Y2Y6 226 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 PRPF4O43172 522 aaKnown RBP eCLIP11.2□□□□□ -0.622e-7■■□□□ 13.2
ERGIC1-211ENST00000523215 CXCR5P32302 372 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 ELF3P78545 371 aaPredicted RBP11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 CNGA2Q16280 664 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 SYDE2Q5VT97 1194 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 CDCA2Q69YH5 1023 aaPredicted RBP11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 VSTM1Q6UX27 236 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 MZB1Q8WU39 189 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 DHRS1Q96LJ7 313 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 ANO3Q9BYT9 981 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 PPCSQ9HAB8 311 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 ERVK-5Q9HDB9 667 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 RABL2AQ9UBK7 228 aaPredicted RBP11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 ITM2BQ9Y287 266 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 SLC45A1Q9Y2W3 748 aa11.2□□□□□ -0.62
ERGIC1-211ENST00000523215 ZSCAN9O15535 394 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms