RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 SPATA31D3P0C874 917 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 RPA1P27694 616 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 MTHFRP42898 656 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 ITIH3Q06033 890 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 POU5F1BQ06416 359 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 PCBP1Q15365 356 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 SLC27A1Q6PCB7 646 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 SPATA31D4Q6ZUB0 917 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 PPFIBP1Q86W92 1011 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 GLYCTKQ8IVS8 523 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 COLGALT2Q8IYK4 626 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 MCPH1Q8NEM0 835 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 DEPTORQ8TB45 409 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 FEZF2Q8TBJ5 459 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 B3GALT6Q96L58 329 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 COLEC11Q9BWP8 271 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 KIAA1024Q9UPX6 916 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 GIT1Q9Y2X7 761 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 NR2E1Q9Y466 385 aa11.33□□□□□ -0.6
CTNNA1-235ENST00000522730 A0A1B0GUA9 196 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 C2CD4DB7Z1M9 353 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 TADA2AO75478 443 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 URODP06132 367 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 CYP11B2P19099 503 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 PTGDRQ13258 359 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 PRPF4BQ13523 1007 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 ECM1Q16610 540 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 PALB2Q86YC2 1186 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 KREMEN2Q8NCW0 462 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 BSNDQ8WZ55 320 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 IFT74Q96LB3 600 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 FBXL18Q96ME1 805 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 NECTIN4Q96NY8 510 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 RPS6KC1Q96S38 1066 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 BHMT2Q9H2M3 363 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 DDX19AQ9NUU7 478 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 PRMT7Q9NVM4 692 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 DZANK1Q9NVP4 752 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 MARCH5Q9NX47 278 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 SNTG2Q9NY99 539 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 CACNG4Q9UBN1 327 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 PCDHB6Q9Y5E3 794 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 IRAK3Q9Y616 596 aa11.32□□□□□ -0.6
CTNNA1-235ENST00000522730 CCDC169A6NNP5 214 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 PP2D1A8MPX8 630 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 TEX28O15482 410 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 SOD2P04179 222 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 PRKCBP05771 671 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 ASGR2P07307 311 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 CDC25AP30304 524 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 GLUD2P49448 558 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 MAPK6Q16659 721 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 PTPN21Q16825 1174 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 SUGP1Q8IWZ8 645 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 SNX29Q8TEQ0 813 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 KIFC3Q9BVG8 833 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 NFKBIZQ9BYH8 718 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 STK39Q9UEW8 545 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 GDAQ9Y2T3 454 aa11.31□□□□□ -0.6
CTNNA1-235ENST00000522730 CCDC195A0A1B0GUA6 201 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 CASTOR2A6NHX0 329 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 E9PMD0 336 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 H3BQV1 296 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 N4BP3O15049 544 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 ST18O60284 1047 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 LILRB3O75022 631 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 TRAPPC10P48553 1259 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 CLCN4P51793 760 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 ORC2Q13416 577 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 PDIA5Q14554 519 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 IER5LQ5T953 404 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 KRT79Q5XKE5 535 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 HAUS3Q68CZ6 603 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 DTHD1Q6ZMT9 781 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 CEP57Q86XR8 500 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 HASPINQ8TF76 798 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 RIN2Q8WYP3 895 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 PLIN2Q99541 437 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 PAAF1Q9BRP4 392 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 HERC2P3Q9BVR0 1158 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 RAB34Q9BZG1 259 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 GPR62Q9BZJ7 368 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 SMOC2Q9H3U7 446 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 FZD8Q9H461 694 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 PDZD7Q9H5P4 517 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 UPF2Q9HAU5 1272 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 MAN1C1Q9NR34 630 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 DNM3Q9UQ16 869 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 TECTAO75443 2155 aa11.3□□□□□ -0.6
CTNNA1-235ENST00000522730 K7ERI5 159 aa11.29□□□□□ -0.6
CTNNA1-235ENST00000522730 ACKR2O00590 384 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms