RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF2-204	ENST00000522539	SKAP1	Q86WV1	359 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	SUMF1	Q8NBK3	374 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	HAS1	Q92839	578 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	ZFP42	Q96MM3	310 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	DDX23	Q9BUQ8	820 aa	Known RBP	13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	GPR62	Q9BZJ7	368 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	CSRNP2	Q9H175	543 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	XPNPEP1	Q9NQW7	623 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	DLL3	Q9NYJ7	618 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	GIT1	Q9Y2X7	761 aa		13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.72	□□□□□ -0.21
BRF2-204	ENST00000522539	NCOR2	Q9Y618	2525 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	CACNA1I	Q9P0X4	2223 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	STK25	O00506	426 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	TBX3	O15119	743 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	ZMYND10	O75800	440 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	DCN	P07585	359 aa	Known RBP	13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	SPATA31D3	P0C874	917 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	SSRP1	Q08945	709 aa	Known RBP	13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	SPIRE1	Q08AE8	756 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	TOB2	Q14106	344 aa	Predicted RBP	13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	EPHA7	Q15375	998 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	INF2	Q27J81	1249 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	USP41	Q3LFD5	358 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	FUT10	Q6P4F1	479 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	NOTUM	Q6P988	496 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	DCLRE1A	Q6PJP8	1040 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	SPATA31D4	Q6ZUB0	917 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	KRT25	Q7Z3Z0	450 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	TRIM22	Q8IYM9	498 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	PJA1	Q8NG27	643 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	KCNG4	Q8TDN1	519 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	RIN2	Q8WYP3	895 aa	Predicted RBP	13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	LXN	Q9BS40	222 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	COLEC11	Q9BWP8	271 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	NFKBIZ	Q9BYH8	718 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	HES2	Q9Y543	173 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	NUMBL	Q9Y6R0	609 aa		13.71	□□□□□ -0.21
BRF2-204	ENST00000522539	NR1I2	O75469	434 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	ERLIN2	O94905	339 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	MYB	P10242	640 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	GCFC2	P16383	781 aa	Known RBP	13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	PSMA5	P28066	241 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	CREM	Q03060	361 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	MBTD1	Q05BQ5	628 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	MXD4	Q14582	209 aa	Predicted RBP	13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	ZNF528	Q3MIS6	628 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	OTUD6A	Q7L8S5	288 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	DGLUCY	Q7Z3D6	616 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	PALB2	Q86YC2	1186 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	KIAA2013	Q8IYS2	634 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	RUBCN	Q92622	972 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	BORCS6	Q96GS4	357 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	B3GALT6	Q96L58	329 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	RPP25	Q9BUL9	199 aa	Known RBP	13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	PIDD1	Q9HB75	910 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	RGL1	Q9NZL6	768 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	FBXW11	Q9UKB1	542 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	ADAM28	Q9UKQ2	775 aa		13.7	□□□□□ -0.22
BRF2-204	ENST00000522539	ARID2	Q68CP9	1835 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	TDRD15	B5MCY1	1934 aa	Known RBP	13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	POTEM	A6NI47	508 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	ZBTB39	O15060	712 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	ARF4	P18085	180 aa	Predicted RBP	13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	RFX1	P22670	979 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	GRIK3	Q13003	919 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	SPECC1	Q5M775	1068 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	GET4	Q7L5D6	327 aa	Predicted RBP	13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	FGF14	Q92915	247 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	ZNF274	Q96GC6	653 aa	Predicted RBP	13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	CPB2	Q96IY4	423 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	AIFM3	Q96NN9	605 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	MTR	Q99707	1265 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	FOXQ1	Q9C009	403 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	NXF3	Q9H4D5	531 aa	Known RBP	13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	ZSWIM4	Q9H7M6	989 aa		13.69	□□□□□ -0.22
BRF2-204	ENST00000522539	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.69	□□□□□ -0.22
BRF2-204	ENST00000522539		A0A1B0GUA9	196 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	SLITRK3	O94933	977 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	LYPLA2	O95372	231 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	POU2F2	P09086	479 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	ARL2	P36404	184 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	GPC5	P78333	572 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	XKR9	Q5GH70	373 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	RTP2	Q5QGT7	225 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	PARM1	Q6UWI2	310 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	RUFY3	Q7L099	469 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	NEK8	Q86SG6	692 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	SHD	Q96IW2	340 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	PHF20	Q9BVI0	1012 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	OSBPL6	Q9BZF3	934 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	ZSWIM6	Q9HCJ5	1215 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	FBXO4	Q9UKT5	387 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	CDH7	Q9ULB5	785 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	DOCK6	Q96HP0	2047 aa		13.68	□□□□□ -0.22
BRF2-204	ENST00000522539	KANSL1L	A0AUZ9	987 aa		13.67	□□□□□ -0.22
BRF2-204	ENST00000522539	INO80B-WBP1	J3KQ70	363 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms