RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TRMT13Q9NUP7 481 aaKnown RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 CDY2AQ9Y6F7 541 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 A0A0B4J269 797 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 A0A1B0GTH6 734 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 ABLIM1O14639 778 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 N4BP3O15049 544 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 TSPAN1O60635 241 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 LDHAP00338 332 aaKnown RBP14.25□□□□□ -0.13
CPNE3-205ENST00000522240 IQCF3P0C7M6 154 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 CDC25BP30305 580 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 ZNF75DP51815 510 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 UBASH3AP57075 661 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 NOLC1Q14978 699 aaKnown RBP eCLIP14.25□□□□□ -0.13
CPNE3-205ENST00000522240 MAN2A1Q16706 1144 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 FILIP1LQ4L180 1135 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 FAM26DQ5JW98 314 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 CEP135Q66GS9 1140 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 MPZL3Q6UWV2 235 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.25□□□□□ -0.13
CPNE3-205ENST00000522240 GPD1LQ8N335 351 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 CAGE1Q8TC20 777 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 TUBGCP2Q9BSJ2 902 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 IFNKQ9P0W0 207 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 ANKFY1Q9P2R3 1169 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 ARMCX3Q9UH62 379 aaPredicted RBP14.25□□□□□ -0.13
CPNE3-205ENST00000522240 SQORQ9Y6N5 450 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 TANC1Q9C0D5 1861 aa14.25□□□□□ -0.13
CPNE3-205ENST00000522240 TTLL13PA6NNM8 815 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 LGALS16A8MUM7 142 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 TLR3O15455 904 aaKnown RBP14.24□□□□□ -0.13
CPNE3-205ENST00000522240 CLDN3O15551 220 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 B4GALT5O43286 388 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 EXTL3O43909 919 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 ADCY5O95622 1261 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 CD4P01730 458 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 CASP4P49662 377 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
CPNE3-205ENST00000522240 NCBP1Q09161 790 aaKnown RBP14.24□□□□□ -0.13
CPNE3-205ENST00000522240 ZNF568Q3ZCX4 644 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 INTS8Q75QN2 995 aaKnown RBP14.24□□□□□ -0.13
CPNE3-205ENST00000522240 CATSPER4Q7RTX7 472 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 ANKRD33Q7Z3H0 272 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 APBB1IPQ7Z5R6 666 aaPredicted RBP14.24□□□□□ -0.13
CPNE3-205ENST00000522240 TMEM40Q8WWA1 233 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 CCDC51Q96ER9 411 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 BORCS6Q96GS4 357 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 XPO4Q9C0E2 1151 aaKnown RBP14.24□□□□□ -0.13
CPNE3-205ENST00000522240 PCIF1Q9H4Z3 704 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 PDZD7Q9H5P4 517 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 CDHR5Q9HBB8 845 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 PTPRHQ9HD43 1115 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 AGPAT5Q9NUQ2 364 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 TAB2Q9NYJ8 693 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 AGO2Q9UKV8 859 aaKnown RBP14.24□□□□□ -0.13
CPNE3-205ENST00000522240 GINS2Q9Y248 185 aa14.24□□□□□ -0.13
CPNE3-205ENST00000522240 OGTO15294 1046 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 CTSHP09668 335 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 MCF2P10911 925 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 ARF4P18085 180 aaPredicted RBP14.23□□□□□ -0.13
CPNE3-205ENST00000522240 THPOP40225 353 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 BFSP1Q12934 665 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 SNRNP35Q16560 246 aaKnown RBP14.23□□□□□ -0.13
CPNE3-205ENST00000522240 KYAT1Q16773 422 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 TMEM132AQ24JP5 1023 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 DCAF4L1Q3SXM0 396 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 NOTUMQ6P988 496 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 SLC39A5Q6ZMH5 540 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 USP38Q8NB14 1042 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 ADPGKQ9BRR6 497 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 MSTO1Q9BUK6 570 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 NOC4LQ9BVI4 516 aaKnown RBP14.23□□□□□ -0.13
CPNE3-205ENST00000522240 HAPLN2Q9GZV7 340 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 TRPV6Q9H1D0 765 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 CDT1Q9H211 546 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 INTS13Q9NVM9 706 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPNE3-205ENST00000522240 RALGAPA2Q2PPJ7 1873 aa14.23□□□□□ -0.13
CPNE3-205ENST00000522240 A0A1B0GUA9 196 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 FAM189A1O60320 539 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 CSDE1O75534 798 aaKnown RBP14.22□□□□□ -0.13
CPNE3-205ENST00000522240 CHRNA1P02708 482 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 KRT13P13646 458 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 MATR3P43243 847 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPNE3-205ENST00000522240 POU5F1Q01860 360 aaKnown RBP14.22□□□□□ -0.13
CPNE3-205ENST00000522240 BFSP2Q13515 415 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 VWA3BQ502W6 1294 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 MIIPQ5JXC2 388 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 EEF1DP3Q658K8 133 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 USP37Q86T82 979 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 FAM228AQ86W67 206 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 SAAL1Q96ER3 474 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 PDLIM2Q96JY6 352 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 ZBTB45Q96K62 511 aaPredicted RBP14.22□□□□□ -0.13
CPNE3-205ENST00000522240 TOX2Q96NM4 488 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 NAP1L5Q96NT1 182 aaPredicted RBP14.22□□□□□ -0.13
CPNE3-205ENST00000522240 C11orf49Q9H6J7 331 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 USP20Q9Y2K6 914 aa14.22□□□□□ -0.13
CPNE3-205ENST00000522240 RANBP2P49792 3224 aaKnown RBP14.22□□□□□ -0.13
CPNE3-205ENST00000522240 ZNF233A6NK53 670 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms