RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	LSM14B	Q9BX40	385 aa	Known RBP	5.78	□□□□□ -1.48
PTPN12-215	ENST00000522115	GPR87	Q9BY21	358 aa		5.78	□□□□□ -1.48
PTPN12-215	ENST00000522115	TRHDE	Q9UKU6	1024 aa		5.78	□□□□□ -1.48
PTPN12-215	ENST00000522115	XDH	P47989	1333 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	ANKRD62	A6NC57	917 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	FZD9	O00144	591 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	GABRD	O14764	452 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	AKR1B10	O60218	316 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	OSM	P13725	252 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	IARS	P41252	1262 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	FLT3LG	P49771	235 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	CRHR2	Q13324	411 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	TOB2	Q14106	344 aa	Predicted RBP	5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	NRN1L	Q496H8	165 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	TRMT2A	Q8IZ69	625 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	MNT	Q99583	582 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	CPEB1	Q9BZB8	566 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	SLC13A1	Q9BZW2	595 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	PARPBP	Q9NWS1	579 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	ZBTB21	Q9ULJ3	1066 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	NOP58	Q9Y2X3	529 aa	Known RBP	5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	SPEF1	Q9Y4P9	236 aa		5.77	□□□□□ -1.49
PTPN12-215	ENST00000522115	SHTN1	A0MZ66	631 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	FAM171A2	A8MVW0	826 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	GRXCR1	A8MXD5	290 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	ENDOD1	O94919	500 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	TACR2	P21452	398 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	GUCY1A2	P33402	732 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	CNGB1	Q14028	1251 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	VPS72	Q15906	364 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	FAM47A	Q5JRC9	791 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	PRAMEF14	Q5SWL7	426 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	GPATCH3	Q96I76	525 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	FAXDC2	Q96IV6	333 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	ADI1	Q9BV57	179 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	VPS11	Q9H270	941 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	ATRNL1	Q5VV63	1379 aa		5.76	□□□□□ -1.49
PTPN12-215	ENST00000522115	WASHC2C	Q9Y4E1	1318 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	PJA2	O43164	708 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	KATNA1	O75449	491 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	HSP90B1	P14625	803 aa	Known RBP	5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	ALOX15	P16050	662 aa	Predicted RBP	5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	SREBF1	P36956	1147 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	CCT2	P78371	535 aa	Known RBP	5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	PTH1R	Q03431	593 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	ITK	Q08881	620 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	SP140	Q13342	867 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	MFSD14B	Q5SR56	506 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	PGM2L1	Q6PCE3	622 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	MB21D1	Q8N884	522 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	CASKIN2	Q8WXE0	1202 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	CYFIP2	Q96F07	1278 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	ASPSCR1	Q9BZE9	553 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	KCNH6	Q9H252	994 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	EPC1	Q9H2F5	836 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	DMRT3	Q9NQL9	472 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	MKS1	Q9NXB0	559 aa		5.75	□□□□□ -1.49
PTPN12-215	ENST00000522115	KLHL33	A6NCF5	533 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	TBKBP1	A7MCY6	615 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	TRIM24	O15164	1050 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	ADCY6	O43306	1168 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	AMH	P03971	560 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	GSPT1	P15170	499 aa	Known RBP	5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	IBSP	P21815	317 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	ADSL	P30566	484 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	ZXDA	P98168	799 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	BMT2	Q1RMZ1	405 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	RPUSD2	Q8IZ73	545 aa	Known RBP	5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	MDM1	Q8TC05	714 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	JADE3	Q92613	823 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	MTMR8	Q96EF0	704 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	CEP95	Q96GE4	821 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	TYW1	Q9NV66	732 aa	Known RBP	5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	FAM30A	Q9NZY2	134 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	HDAC5	Q9UQL6	1122 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	PCDHGA2	Q9Y5H1	932 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	MRFAP1	Q9Y605	127 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	ZMYM3	Q14202	1370 aa		5.74	□□□□□ -1.49
PTPN12-215	ENST00000522115	PRR5-ARHGAP8	B1AHC4	643 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	PCDHGA12	O60330	932 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	C1S	P09871	688 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	IL2RB	P14784	551 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	MGAT1	P26572	445 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	SLC6A9	P48067	706 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	SEPT2	Q15019	361 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	CSRP2	Q16527	193 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	RABL3	Q5HYI8	236 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115		Q8N1X5	172 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	LANCL2	Q9NS86	450 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	HOMER2	Q9NSB8	354 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	SIK3	Q9Y2K2	1263 aa		5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.73	□□□□□ -1.49
PTPN12-215	ENST00000522115	PCDHGA8	Q9Y5G5	932 aa		5.73	□□□□□ -1.49

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