RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 RAB24Q969Q5 203 aa6.72□□□□□ -1.33
SKP1-208ENST00000521216 IL17RAQ96F46 866 aa6.72□□□□□ -1.33
SKP1-208ENST00000521216 LOXL4Q96JB6 756 aa6.72□□□□□ -1.33
SKP1-208ENST00000521216 SENP6Q9GZR1 1112 aaPredicted RBP6.72□□□□□ -1.33
SKP1-208ENST00000521216 TCF7L1Q9HCS4 588 aa6.72□□□□□ -1.33
SKP1-208ENST00000521216 TRPS1Q9UHF7 1281 aa6.72□□□□□ -1.33
SKP1-208ENST00000521216 ZMYM3Q14202 1370 aa6.71□□□□□ -1.33
SKP1-208ENST00000521216 ITGB3P05106 788 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 VCAM1P19320 739 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 CRHR1P34998 444 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 GZMKP49863 264 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 FKBP15Q5T1M5 1219 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 GJC2Q5T442 439 aaPredicted RBP6.71□□□□□ -1.34
SKP1-208ENST00000521216 PDZD4Q76G19 769 aaPredicted RBP6.71□□□□□ -1.34
SKP1-208ENST00000521216 CATIPQ7Z7H3 387 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 WDR75Q8IWA0 830 aaKnown RBP6.71□□□□□ -1.34
SKP1-208ENST00000521216 D2HGDHQ8N465 521 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 LILRA3Q8N6C8 439 aaPredicted RBP6.71□□□□□ -1.34
SKP1-208ENST00000521216 OR7D4Q8NG98 312 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 KAT5Q92993 513 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 TSR2Q969E8 191 aaKnown RBP6.71□□□□□ -1.34
SKP1-208ENST00000521216 ZNF512Q96ME7 567 aaPredicted RBP6.71□□□□□ -1.34
SKP1-208ENST00000521216 PDCD2LQ9BRP1 358 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 BCO1Q9HAY6 547 aa6.71□□□□□ -1.34
SKP1-208ENST00000521216 RAD17O75943 681 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 EDNRBP24530 442 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 SREBF1P36956 1147 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 FOXL1Q12952 345 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 DUSP8Q13202 625 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 RRP12Q5JTH9 1297 aaKnown RBP6.7□□□□□ -1.34
SKP1-208ENST00000521216 PRAMEF14Q5SWL7 426 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 IFIT1BQ5T764 474 aaKnown RBP6.7□□□□□ -1.34
SKP1-208ENST00000521216 RSPH3Q86UC2 560 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 SGMS1Q86VZ5 419 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 RELTQ969Z4 430 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 MANSC1Q9H8J5 431 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 MSL2Q9HCI7 577 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 TDP1Q9NUW8 608 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 HDAC5Q9UQL6 1122 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 IPPQ9Y573 584 aa6.7□□□□□ -1.34
SKP1-208ENST00000521216 HOXA3O43365 443 aaPredicted RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 TSPAN6O43657 245 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 SYN1P17600 705 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 PDCP20941 246 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 CYP2C19P33261 490 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 WASP42768 502 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 SLC6A9P48067 706 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 HHEXQ03014 270 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 MRPL49Q13405 166 aaKnown RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 XYLT1Q86Y38 959 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 ELOA2Q8IYF1 753 aaPredicted RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 TRMT2AQ8IZ69 625 aaKnown RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 CHST13Q8NET6 341 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 HOXB13Q92826 284 aaPredicted RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 RBM15Q96T37 977 aaKnown RBP eCLIP6.69□□□□□ -1.342e-9■■■□□ 18.8
SKP1-208ENST00000521216 NUP88Q99567 741 aaPredicted RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 SSBP3Q9BWW4 388 aaPredicted RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 DEF6Q9H4E7 631 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 LANCL2Q9NS86 450 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 TMEM140Q9NV12 185 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 ST6GALNAC2Q9UJ37 374 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 AJAP1Q9UKB5 411 aaPredicted RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 PNMA8BQ9ULN7 279 aaPredicted RBP6.69□□□□□ -1.34
SKP1-208ENST00000521216 SIK3Q9Y2K2 1263 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 SH3BP1Q9Y3L3 701 aa6.69□□□□□ -1.34
SKP1-208ENST00000521216 K7ESM1 405 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 AP1G1O43747 822 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 DTNBO60941 627 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 ZNF623O75123 536 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 RFPL1O75677 317 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 PARNO95453 639 aaKnown RBP6.68□□□□□ -1.34
SKP1-208ENST00000521216 POU2F2P09086 479 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 RAP2AP10114 183 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 GNAT2P19087 354 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 AKAP5P24588 427 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 ICAM4Q14773 271 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 ELAVL1Q15717 326 aaKnown RBP6.68□□□□□ -1.34
SKP1-208ENST00000521216 MFSD14BQ5SR56 506 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 POLNQ7Z5Q5 900 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 GRAMD1CQ8IYS0 662 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 MB21D1Q8N884 522 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 Q8TCH9 128 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 CAMKK2Q96RR4 588 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 CPPED1Q9BRF8 314 aaPredicted RBP6.68□□□□□ -1.34
SKP1-208ENST00000521216 GTPBP4Q9BZE4 634 aaKnown RBP6.68□□□□□ -1.34
SKP1-208ENST00000521216 ENKD1Q9H0I2 346 aa6.68□□□□□ -1.34
SKP1-208ENST00000521216 MYBBP1AQ9BQG0 1328 aaKnown RBP6.68□□□□□ -1.34
SKP1-208ENST00000521216 PRPF3O43395 683 aaKnown RBP6.67□□□□□ -1.34
SKP1-208ENST00000521216 FOXD2O60548 495 aaPredicted RBP6.67□□□□□ -1.34
SKP1-208ENST00000521216 MFAP3LO75121 409 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 OFD1O75665 1012 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 RPLP2P05387 115 aaKnown RBP6.67□□□□□ -1.34
SKP1-208ENST00000521216 IL2RBP14784 551 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 COMTP21964 271 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 HS1BP3Q53T59 392 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 PPP4R3AQ6IN85 833 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 MFSD5Q6N075 450 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 ZNF585AQ6P3V2 769 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 USP45Q70EL2 814 aa6.67□□□□□ -1.34
SKP1-208ENST00000521216 DRC7Q8IY82 874 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms