RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 LINS1Q8NG48 757 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 PHOSPHO2Q8TCD6 241 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 ACER1Q8TDN7 264 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 PABPC5Q96DU9 382 aaKnown RBP4.75□□□□□ -1.65
VPS13B-208ENST00000521037 KREMEN1Q96MU8 473 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 TMPRSS5Q9H3S3 457 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 HIPK3Q9H422 1215 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.75□□□□□ -1.65
VPS13B-208ENST00000521037 AKAP13Q12802 2813 aa4.75□□□□□ -1.65
VPS13B-208ENST00000521037 ZNF536O15090 1300 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 A0A1W2PRG0 241 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 TMEM82A0PJX8 343 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 STRNO43815 780 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 DDX58O95786 925 aaKnown RBP4.74□□□□□ -1.65
VPS13B-208ENST00000521037 PGK2P07205 417 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 EIF4BP23588 611 aaKnown RBP4.74□□□□□ -1.65
VPS13B-208ENST00000521037 RFX5P48382 616 aaPredicted RBP4.74□□□□□ -1.65
VPS13B-208ENST00000521037 GJA9P57773 515 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 ERVFRD-1P60508 538 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 DEFB103AP81534 67 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 TCEAL5Q5H9L2 206 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 EGFLAMQ63HQ2 1017 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 CCDC174Q6PII3 467 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 ATG9AQ7Z3C6 839 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 VPS37DQ86XT2 251 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 REPS2Q8NFH8 660 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 TET1Q8NFU7 2136 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 KLHDC4Q8TBB5 520 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 WDR66Q8TBY9 1149 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 MZB1Q8WU39 189 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 SUCLG2Q96I99 432 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 MSLNLQ96KJ4 702 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 C17orf80Q9BSJ5 609 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 SPATC1LQ9H0A9 340 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 OSBPL2Q9H1P3 480 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 LUC7LQ9NQ29 371 aaKnown RBP4.74□□□□□ -1.65
VPS13B-208ENST00000521037 SIRT5Q9NXA8 310 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 ZBTB21Q9ULJ3 1066 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 ADAMTS5Q9UNA0 930 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 SIP14410 1827 aa4.74□□□□□ -1.65
VPS13B-208ENST00000521037 SPTBN2O15020 2390 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 MROH5Q6ZUA9 1318 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 HELZ2Q9BYK8 2649 aaKnown RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 CEP295Q9C0D2 2601 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 A0A0U1RQG5 324 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 FAM221AA4D161 298 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 DUSP11O75319 330 aaKnown RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 CILPO75339 1184 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 EYA4O95677 639 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 AKR1A1P14550 325 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 PNLIPP16233 465 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 SDHBP21912 280 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 TGM1P22735 817 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 BTDP43251 543 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 KIR2DL1P43626 348 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 KIR2DL2P43627 348 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 RACK1P63244 317 aaKnown RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 SIGLEC14Q08ET2 396 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 HYAL1Q12794 435 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 PICALMQ13492 652 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 CAMK1Q14012 370 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 PUM1Q14671 1186 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 ZXDCQ2QGD7 858 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 ZNF394Q53GI3 561 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 MAMDC4Q6UXC1 1216 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 RNF111Q6ZNA4 994 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 ZNF662Q6ZS27 426 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 DPP9Q86TI2 863 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 LINC01356Q8N9X3 169 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 FAM13CQ8NE31 585 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 ENOX1Q8TC92 643 aaKnown RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 NUP133Q8WUM0 1156 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 NKD2Q969F2 451 aaPredicted RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 MRPL38Q96DV4 380 aaKnown RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 MAP6Q96JE9 813 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 SLC9A7Q96T83 725 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 PLCD4Q9BRC7 762 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 ASPNQ9BXN1 380 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 HDAC8Q9BY41 377 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 KIAA1683Q9H0B3 1180 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 MIR1-1HGQ9H1L0 117 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 ADAM7Q9H2U9 754 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 PIF1Q9H611 641 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 CNNM1Q9NRU3 951 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 CLEC1BQ9P126 229 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 KLHL14Q9P2G3 628 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 LAS1LQ9Y4W2 734 aaKnown RBP4.73□□□□□ -1.65
VPS13B-208ENST00000521037 PCDHA5Q9Y5H7 936 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 PARP14Q460N5 1801 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 KALRNO60229 2985 aa4.73□□□□□ -1.65
VPS13B-208ENST00000521037 MROH7-TTC4A0A0A0MT08 1334 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 MROH7Q68CQ1 1323 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 LAMA1P25391 3075 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 MYH2Q9UKX2 1941 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 ZC3H12DA2A288 527 aaKnown RBP4.72□□□□□ -1.65
VPS13B-208ENST00000521037 CHURC1-FNTBB4DL54 471 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 LINC01565O15544 149 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 DNAJA2O60884 412 aa4.72□□□□□ -1.65
VPS13B-208ENST00000521037 GLRX3O76003 335 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms