RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 GPD1LQ8N335 351 aa27.77■■■□□ 2.04
COL13A1-213ENST00000520267 IFT74Q96LB3 600 aa27.77■■■□□ 2.04
COL13A1-213ENST00000520267 ARHGAP28Q9P2N2 729 aa27.77■■■□□ 2.04
COL13A1-213ENST00000520267 PTPRFP10586 1907 aa27.77■■■□□ 2.04
COL13A1-213ENST00000520267 SART1O43290 800 aaKnown RBP27.76■■■□□ 2.04
COL13A1-213ENST00000520267 ERVK-9P63128 1117 aa27.76■■■□□ 2.04
COL13A1-213ENST00000520267 VGLL4Q14135 290 aa27.76■■■□□ 2.04
COL13A1-213ENST00000520267 BICD1Q96G01 975 aa27.76■■■□□ 2.04
COL13A1-213ENST00000520267 RTN2O75298 545 aa27.76■■■□□ 2.03
COL13A1-213ENST00000520267 PRPF4BQ13523 1007 aaKnown RBP27.76■■■□□ 2.03
COL13A1-213ENST00000520267 BRDTQ58F21 947 aaPredicted RBP27.76■■■□□ 2.03
COL13A1-213ENST00000520267 ANKRD35Q8N283 1001 aa27.76■■■□□ 2.03
COL13A1-213ENST00000520267 FBXL13Q8NEE6 735 aa27.76■■■□□ 2.03
COL13A1-213ENST00000520267 CHST13Q8NET6 341 aa27.76■■■□□ 2.03
COL13A1-213ENST00000520267 AFAP1L1Q8TED9 768 aa27.76■■■□□ 2.03
COL13A1-213ENST00000520267 FAM213AQ9BRX8 229 aa27.76■■■□□ 2.03
COL13A1-213ENST00000520267 MAF1Q9H063 256 aa27.76■■■□□ 2.03
COL13A1-213ENST00000520267 RAB20Q9NX57 234 aa27.76■■■□□ 2.03
COL13A1-213ENST00000520267 CCDC188H7C350 402 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 DLATP10515 647 aaKnown RBP27.75■■■□□ 2.03
COL13A1-213ENST00000520267 GARTP22102 1010 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 GUCY2FP51841 1108 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 HADHBP55084 474 aaKnown RBP27.75■■■□□ 2.03
COL13A1-213ENST00000520267 SV2AQ7L0J3 742 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 CNKSR2Q8WXI2 1034 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 FAM84AQ96KN4 292 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 CTTNBP2NLQ9P2B4 639 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 ZNFX1Q9P2E3 1918 aaKnown RBP27.75■■■□□ 2.03
COL13A1-213ENST00000520267 MMEP08473 750 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 ICAM3P32942 547 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 GPC5P78333 572 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 EMC2Q15006 297 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 SEPT14Q6ZU15 432 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 CCDC125Q86Z20 511 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 DNERQ8NFT8 737 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 NT5C1BQ96P26 610 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 ZNF302Q9NR11 478 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 SYNGAP1Q96PV0 1343 aa27.75■■■□□ 2.03
COL13A1-213ENST00000520267 ATG7O95352 703 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 GTF2H1P32780 548 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 ALS2CLQ60I27 953 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 TATDN2Q93075 761 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 SH3GL2Q99962 352 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 BTBD7Q9P203 1132 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 CHORDC1Q9UHD1 332 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-213ENST00000520267 MAFBQ9Y5Q3 323 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-213ENST00000520267 DICER1Q9UPY3 1922 aaKnown RBP27.74■■■□□ 2.03
COL13A1-213ENST00000520267 POLGP54098 1239 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-213ENST00000520267 FMO1Q01740 532 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 KCTD19Q17RG1 926 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-213ENST00000520267 TMEM143Q96AN5 459 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 TTC7AQ9ULT0 858 aaPredicted RBP27.74■■■□□ 2.03
COL13A1-213ENST00000520267 ALG6Q9Y672 507 aa27.74■■■□□ 2.03
COL13A1-213ENST00000520267 HSF2BPO75031 334 aa27.73■■■□□ 2.03
COL13A1-213ENST00000520267 FGGP02679 453 aa27.73■■■□□ 2.03
COL13A1-213ENST00000520267 TCEAL1Q15170 157 aa27.73■■■□□ 2.03
COL13A1-213ENST00000520267 LBX2Q6XYB7 198 aa27.73■■■□□ 2.03
COL13A1-213ENST00000520267 DHX38Q92620 1227 aaKnown RBP27.73■■■□□ 2.03
COL13A1-213ENST00000520267 TAF1DQ9H5J8 278 aaPredicted RBP27.73■■■□□ 2.03
COL13A1-213ENST00000520267 CCDC66A2RUB6 948 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 BHMG1C9JSJ3 638 aaPredicted RBP27.72■■■□□ 2.03
COL13A1-213ENST00000520267 ALDH5A1P51649 535 aaPredicted RBP27.72■■■□□ 2.03
COL13A1-213ENST00000520267 GOLGA6L1Q8N7Z2 621 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 ZIM3Q96PE6 472 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 OATP04181 439 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 CYP11B1P15538 503 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 CAPN2P17655 700 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 USP37Q86T82 979 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 PI4K2AQ9BTU6 479 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 AMACRQ9UHK6 382 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 DIS3Q9Y2L1 958 aaKnown RBP27.72■■■□□ 2.03
COL13A1-213ENST00000520267 NR2E1Q9Y466 385 aa27.72■■■□□ 2.03
COL13A1-213ENST00000520267 ATMINO43313 823 aaPredicted RBP27.71■■■□□ 2.03
COL13A1-213ENST00000520267 GZMAP12544 262 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 LIG4P49917 911 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 DDX42Q86XP3 938 aaKnown RBP eCLIP27.71■■■□□ 2.03
COL13A1-213ENST00000520267 ASAP3Q8TDY4 903 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 WHAMMQ8TF30 809 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 ZNF516Q92618 1163 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 ALG3Q92685 438 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 RNPC3Q96LT9 517 aaKnown RBP27.71■■■□□ 2.03
COL13A1-213ENST00000520267 CARD9Q9H257 536 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 ZNF233A6NK53 670 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 H0YCG3 227 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 ECHS1P30084 290 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 ZNF211Q13398 564 aaPredicted RBP27.71■■■□□ 2.03
COL13A1-213ENST00000520267 NAA35Q5VZE5 725 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 C11orf63Q6NUN7 778 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 MREGQ8N565 214 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 SLITRK6Q9H5Y7 841 aa27.71■■■□□ 2.03
COL13A1-213ENST00000520267 A0A0G2JMZ2 1700 aa27.7■■■□□ 2.03
COL13A1-213ENST00000520267 TMEM110-MUSTN1A8MSY1 372 aa27.7■■■□□ 2.03
COL13A1-213ENST00000520267 HNRNPH2P55795 449 aaKnown RBP27.7■■■□□ 2.03
COL13A1-213ENST00000520267 GOLGA6CA6NDK9 693 aa27.7■■■□□ 2.02
COL13A1-213ENST00000520267 GOLGA6DP0CG33 693 aa27.7■■■□□ 2.02
COL13A1-213ENST00000520267 GLRA2P23416 452 aa27.7■■■□□ 2.02
COL13A1-213ENST00000520267 LMBRD2Q68DH5 695 aaPredicted RBP27.7■■■□□ 2.02
COL13A1-213ENST00000520267 IQCKQ8N0W5 287 aa27.7■■■□□ 2.02
COL13A1-213ENST00000520267 PORCNQ9H237 461 aa27.7■■■□□ 2.02
COL13A1-213ENST00000520267 DHX33Q9H6R0 707 aaKnown RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms