RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 TGS1Q96RS0 853 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ADAM2Q99965 735 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 FDXACB1Q9BRP7 624 aaPredicted RBP6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 PLVAPQ9BX97 442 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM117Q9H0C3 514 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 BCAS3Q9H6U6 928 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 KIAA1586Q9HCI6 787 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ERVK-5Q9HDB9 667 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 OLFML3Q9NRN5 406 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 DACH1Q9UI36 760 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 ADGRA3Q8IWK6 1321 aa6.17□□□□□ -1.42
CTNNA1-220ENST00000520260 A0A0U1RQF3 1178 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 E9PMD0 336 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 KIF2AO00139 706 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 ADAMTS3O15072 1205 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 EIF3DO15371 548 aaKnown RBP eCLIP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 POLR2DO15514 142 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 CLDN3O15551 220 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TRAPPC3O43617 180 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 NBNO60934 754 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TOM1L1O75674 476 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 FGFR1OPO95684 399 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 ACRP10323 421 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 MCF2P10911 925 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TNNT1P13805 278 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 LIG1P18858 919 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 DNAJB2P25686 324 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 RPL13P26373 211 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 SLC12A3P55017 1021 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 POU5F1Q01860 360 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 UBE3AQ05086 875 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TYRO3Q06418 890 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 ELAVL2Q12926 359 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 GRB10Q13322 594 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 CAPSQ13938 189 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 GIT2Q14161 759 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 SHHQ15465 462 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 SURF1Q15526 300 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF568Q3ZCX4 644 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 HABP4Q5JVS0 413 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 ATF7IP2Q5U623 682 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 SARM1Q6SZW1 724 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 C1orf186Q6ZWK4 172 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 MAEAQ7L5Y9 396 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 PDILTQ8N807 584 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 FSIP1Q8NA03 581 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 RNF169Q8NCN4 708 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 FBXO22Q8NEZ5 403 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 DDX12PQ92771 950 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TOP1MTQ969P6 601 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TIGD1Q96MW7 591 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 UROC1Q96N76 676 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TSG101Q99816 390 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 NTPCRQ9BSD7 190 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TSPYL1Q9H0U9 437 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 LMAN2LQ9H0V9 348 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 ADAMTS10Q9H324 1103 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 ST6GALNAC4Q9H4F1 302 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM105AQ9NUU6 356 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 PANK4Q9NVE7 773 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TBC1D7Q9P0N9 293 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 CALCOCO1Q9P1Z2 691 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 PCDHA7Q9UN72 937 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 GIT1Q9Y2X7 761 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 NOC2LQ9Y3T9 749 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 TCHHQ07283 1943 aa6.16□□□□□ -1.42
CTNNA1-220ENST00000520260 LTBP2Q14767 1821 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 CEP290O15078 2479 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 A0A1B0GUA9 196 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 PP2D1A8MPX8 630 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 TULP2O00295 520 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 ENPP3O14638 875 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 EDIL3O43854 480 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 DTNBO60941 627 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF623O75123 536 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 UPP2O95045 317 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 KIF4AO95239 1232 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 GCNT3O95395 438 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 TUBB4AP04350 444 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 PFKFB1P16118 471 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 ATF7P17544 494 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 GLRA2P23416 452 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 CDC25AP30304 524 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 NPTX2P47972 431 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF131P52739 623 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 MBTD1Q05BQ5 628 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 PPP2R3AQ06190 1150 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 MCM6Q14566 821 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 TIGD5Q53EQ6 642 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 RASIP1Q5U651 963 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 MPZL3Q6UWV2 235 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 NYAP1Q6ZVC0 841 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 UNC13DQ70J99 1090 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 CCDC186Q7Z3E2 898 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 HAUS6Q7Z4H7 955 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM228AQ86W67 206 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 NT5DC4Q86YG4 428 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 ELOA2Q8IYF1 753 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 HS6ST3Q8IZP7 471 aa6.15□□□□□ -1.42
CTNNA1-220ENST00000520260 IPO4Q8TEX9 1081 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms