RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 ARL2P36404 184 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 CASP8Q14790 479 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.1□□□□□ -0.95
HMGB4-203ENST00000519684 EEPD1Q7L9B9 569 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 TAS1R3Q7RTX0 852 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 MSL3Q8N5Y2 521 aaKnown RBP9.1□□□□□ -0.95
HMGB4-203ENST00000519684 SLC35G2Q8TBE7 412 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 AFAP1L1Q8TED9 768 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 SLC20A1Q8WUM9 679 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 POP1Q99575 1024 aaKnown RBP9.1□□□□□ -0.95
HMGB4-203ENST00000519684 SYT17Q9BSW7 474 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 MROH8Q9H579 483 aa9.1□□□□□ -0.95
HMGB4-203ENST00000519684 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.1□□□□□ -0.95
HMGB4-203ENST00000519684 TOPORSQ9NS56 1045 aaPredicted RBP9.1□□□□□ -0.95
HMGB4-203ENST00000519684 RBM12Q9NTZ6 932 aaKnown RBP9.1□□□□□ -0.95
HMGB4-203ENST00000519684 SUCLA2Q9P2R7 463 aaPredicted RBP9.1□□□□□ -0.95
HMGB4-203ENST00000519684 AGO2Q9UKV8 859 aaKnown RBP9.1□□□□□ -0.95
HMGB4-203ENST00000519684 CEP104O60308 925 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 ZC3H11AO75152 810 aaKnown RBP eCLIP9.09□□□□□ -0.95
HMGB4-203ENST00000519684 ZMYND10O75800 440 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 LDHAP00338 332 aaKnown RBP9.09□□□□□ -0.95
HMGB4-203ENST00000519684 PGK2P07205 417 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 PDE6CP51160 858 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 PSMD6Q15008 389 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 LY6KQ17RY6 165 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
HMGB4-203ENST00000519684 WDR44Q5JSH3 913 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 CCNI2Q6ZMN8 369 aaPredicted RBP9.09□□□□□ -0.95
HMGB4-203ENST00000519684 ENOSF1Q7L5Y1 443 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 SLFN11Q7Z7L1 901 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 RHOT2Q8IXI1 618 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 EXOC8Q8IYI6 725 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 FAM71AQ8IYT1 594 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 OLIG1Q8TAK6 271 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 SEMA4DQ92854 862 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 GLG1Q92896 1179 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 C1orf112Q9NSG2 853 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 STIM2Q9P246 746 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 PGRMC1O00264 195 aaKnown RBP9.09□□□□□ -0.95
HMGB4-203ENST00000519684 RTN2O75298 545 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 SGPL1O95470 568 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 PIGRP01833 764 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 TNNI1P19237 187 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 SNAPC2Q13487 334 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 HSP90B2PQ58FF3 399 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 SV2AQ7L0J3 742 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 USP38Q8NB14 1042 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 TAS1R2Q8TE23 839 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 GTF3C2Q8WUA4 911 aaPredicted RBP9.09□□□□□ -0.95
HMGB4-203ENST00000519684 TCP11Q8WWU5 503 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 PSPC1Q8WXF1 523 aaKnown RBP9.09□□□□□ -0.95
HMGB4-203ENST00000519684 SHC3Q92529 594 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 KCNN1Q92952 543 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 KAT5Q92993 513 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 KREMEN1Q96MU8 473 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 PCYT2Q99447 389 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 MSTO1Q9BUK6 570 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 THAP2Q9H0W7 228 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 GOLPH3Q9H4A6 298 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 TMEM134Q9H6X4 195 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 VIPAS39Q9H9C1 493 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 ST7Q9NRC1 585 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 ANKFY1Q9P2R3 1169 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 RBPJLQ9UBG7 517 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
HMGB4-203ENST00000519684 POLR3GO15318 223 aaPredicted RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 CYP26A1O43174 497 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 GAS2O43903 313 aaKnown RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 MAFO75444 373 aaPredicted RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 FTLP02792 175 aaPredicted RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 KRT5P13647 590 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 PIK3CAP42336 1068 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 GPC5P78333 572 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 TARBP2Q15633 366 aaKnown RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 PTPROQ16827 1216 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 CELF3Q5SZQ8 465 aaKnown RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 TAF3Q5VWG9 929 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 NT5DC3Q86UY8 548 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 IFT20Q8IY31 132 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 ACTRT1Q8TDG2 376 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 EPS8L1Q8TE68 723 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 BBXQ8WY36 941 aaPredicted RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 ISCUQ9H1K1 167 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 SUGCTQ9HAC7 445 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 PDE11AQ9HCR9 933 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 TXNRD2Q9NNW7 524 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 OSGEPQ9NPF4 335 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 TAS2R14Q9NYV8 317 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 RBAKQ9NYW8 714 aaPredicted RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 CTTNBP2NLQ9P2B4 639 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 STYXL1Q9Y6J8 313 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 LOC102724159A0A0B4J2E5 919 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 BUB1BO60566 1050 aaPredicted RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 CLSTN1O94985 981 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 MARK3P27448 753 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 EFNA5P52803 228 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 RNASE9P60153 205 aaKnown RBP9.08□□□□□ -0.96
HMGB4-203ENST00000519684 FAM193AP78312 1265 aa9.08□□□□□ -0.96
HMGB4-203ENST00000519684 SLC7A5Q01650 507 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms