RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 GPR149Q86SP6 731 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 NOSTRINQ8IVI9 506 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 ZDHHC14Q8IZN3 488 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 FBXL6Q8N531 539 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 KREMEN2Q8NCW0 462 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 BSNDQ8WZ55 320 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 HERC2P3Q9BVR0 1158 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 TRIM6Q9C030 488 aaPredicted RBP13.78□□□□□ -0.2
CSMD1-205ENST00000519623 RXFP1Q9HBX9 757 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 CHST7Q9NS84 486 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 USTQ9Y2C2 406 aa13.78□□□□□ -0.2
CSMD1-205ENST00000519623 C2CD2LO14523 706 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 TEX28O15482 410 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 MUTP22033 750 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.21
CSMD1-205ENST00000519623 TRAPPC10P48553 1259 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 TOB1P50616 345 aaPredicted RBP13.77□□□□□ -0.21
CSMD1-205ENST00000519623 C8orf34Q49A92 452 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 ALYREFQ86V81 257 aaKnown RBP13.77□□□□□ -0.21
CSMD1-205ENST00000519623 HACE1Q8IYU2 909 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 ERMNQ8TAM6 284 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 PRIMPOLQ96LW4 560 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 COLEC11Q9BWP8 271 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 GPR62Q9BZJ7 368 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 SFXN1Q9H9B4 322 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 SH2B1Q9NRF2 756 aaPredicted RBP13.77□□□□□ -0.21
CSMD1-205ENST00000519623 PRMT7Q9NVM4 692 aaPredicted RBP13.77□□□□□ -0.21
CSMD1-205ENST00000519623 KLK14Q9P0G3 267 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 LIMD1Q9UGP4 676 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 SSX2IPQ9Y2D8 614 aa13.77□□□□□ -0.21
CSMD1-205ENST00000519623 ZMYM2Q9UBW7 1377 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 NR1I2O75469 434 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 BRD1O95696 1058 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 URODP06132 367 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 GLUD2P49448 558 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSMD1-205ENST00000519623 DSG1Q02413 1049 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 PDIA5Q14554 519 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 NBR1Q14596 966 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 ZBTB33Q86T24 672 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 PRSS33Q8NF86 280 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 CCDC113Q9H0I3 377 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 PDZD7Q9H5P4 517 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 POLD4Q9HCU8 107 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 SORCS3Q9UPU3 1222 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 USP20Q9Y2K6 914 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
CSMD1-205ENST00000519623 MTCL1Q9Y4B5 1905 aaKnown RBP13.75□□□□□ -0.21
CSMD1-205ENST00000519623 ARHGEF35A5YM69 484 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 ACKR2O00590 384 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 PDGFBP01127 241 aaPredicted RBP13.75□□□□□ -0.21
CSMD1-205ENST00000519623 EDN1P05305 212 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 ASGR2P07307 311 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 ADH1AP07327 375 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 AVPR2P30518 371 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 CCT6AP40227 531 aaKnown RBP13.75□□□□□ -0.21
CSMD1-205ENST00000519623 VCPP55072 806 aaKnown RBP13.75□□□□□ -0.21
CSMD1-205ENST00000519623 GRIK3Q13003 919 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 ZBTB8OSQ8IWT0 167 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 SUGP1Q8IWZ8 645 aaKnown RBP13.75□□□□□ -0.21
CSMD1-205ENST00000519623 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 UBALD2Q8IYN6 164 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 TDRD5Q8NAT2 981 aaKnown RBP13.75□□□□□ -0.21
CSMD1-205ENST00000519623 FAM184AQ8NB25 1140 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
CSMD1-205ENST00000519623 RABGGTAQ92696 567 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 B3GALT6Q96L58 329 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 C2orf40Q9H1Z8 148 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 CXCL16Q9H2A7 254 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 SMOC2Q9H3U7 446 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 ADAM28Q9UKQ2 775 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 DENND4AQ7Z401 1863 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 KMT2EQ8IZD2 1858 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 CACNA1HO95180 2353 aa13.75□□□□□ -0.21
CSMD1-205ENST00000519623 N4BP3O15049 544 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 PAPLNO95428 1278 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 C1RP00736 705 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 NAMPTP43490 491 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 TCF15Q12870 199 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 PTGDRQ13258 359 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 PRPF4BQ13523 1007 aaKnown RBP13.74□□□□□ -0.21
CSMD1-205ENST00000519623 MTMR3Q13615 1198 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 NAB2Q15742 525 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 IL17AQ16552 155 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 MAPK6Q16659 721 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 USP41Q3LFD5 358 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 FUT10Q6P4F1 479 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 LILRA6Q6PI73 481 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 IGSF22Q8N9C0 903 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 PAAF1Q9BRP4 392 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 BHMT2Q9H2M3 363 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 MAN1C1Q9NR34 630 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 SNTG2Q9NY99 539 aa13.74□□□□□ -0.21
CSMD1-205ENST00000519623 CACNG4Q9UBN1 327 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms