RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 KANSL2Q9H9L4 492 aa4.1□□□□□ -1.75
PCM1-208ENST00000518877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.1□□□□□ -1.75
PCM1-208ENST00000518877 OXSMQ9NWU1 459 aa4.1□□□□□ -1.75
PCM1-208ENST00000518877 USP15Q9Y4E8 981 aaPredicted RBP4.1□□□□□ -1.75
PCM1-208ENST00000518877 SPO11Q9Y5K1 396 aa4.1□□□□□ -1.75
PCM1-208ENST00000518877 PROB1E7EW31 1015 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 PPP1R12AO14974 1030 aaPredicted RBP4.09□□□□□ -1.75
PCM1-208ENST00000518877 IGLV2-14P01704 120 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 JMJD7P0C870 316 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 RBP3P10745 1247 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 ATP2A2P16615 1042 aaKnown RBP4.09□□□□□ -1.75
PCM1-208ENST00000518877 LMBR1LQ6UX01 489 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 UBE2R2Q712K3 238 aaPredicted RBP4.09□□□□□ -1.75
PCM1-208ENST00000518877 TAS1R1Q7RTX1 841 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 GPRIN1Q7Z2K8 1008 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 SYT12Q8IV01 421 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 CDC5LQ99459 802 aaKnown RBP4.09□□□□□ -1.75
PCM1-208ENST00000518877 ADAM2Q99965 735 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 ORAI3Q9BRQ5 295 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 ZMAT4Q9H898 229 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 H2AFY2Q9P0M6 372 aaPredicted RBP4.09□□□□□ -1.75
PCM1-208ENST00000518877 CDK11AQ9UQ88 783 aaPredicted RBP4.09□□□□□ -1.75
PCM1-208ENST00000518877 FPGT-TNNI3KV9GXZ4 949 aa4.09□□□□□ -1.75
PCM1-208ENST00000518877 ELL2O00472 640 aaPredicted RBP4.08□□□□□ -1.76
PCM1-208ENST00000518877 CDKL5O76039 1030 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 FOSP01100 380 aaPredicted RBP4.08□□□□□ -1.76
PCM1-208ENST00000518877 CLEC2LP0C7M8 214 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 EGR2P11161 476 aaPredicted RBP4.08□□□□□ -1.76
PCM1-208ENST00000518877 CD40P25942 277 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 FLT3P36888 993 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 MPLP40238 635 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 ABCG1P45844 678 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 MGAT5Q09328 741 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 CFAP100Q494V2 611 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 ANKS6Q68DC2 871 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 DRICH1Q6PGQ1 229 aaPredicted RBP4.08□□□□□ -1.76
PCM1-208ENST00000518877 RNF169Q8NCN4 708 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 GAB3Q8WWW8 586 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 TFAP2CQ92754 450 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 OSBPL2Q9H1P3 480 aa4.08□□□□□ -1.76
PCM1-208ENST00000518877 ZMYM3Q14202 1370 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 B5MCH6 92 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 NRP2O60462 931 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 RFPL3O75679 317 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 FDXRP22570 491 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 CTGFP29279 349 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 NRG3P56975 720 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 ESPNLQ6ZVH7 1005 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 SRRM1Q8IYB3 904 aaKnown RBP4.07□□□□□ -1.76
PCM1-208ENST00000518877 SCARB1Q8WTV0 552 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 ZNF496Q96IT1 587 aaPredicted RBP4.07□□□□□ -1.76
PCM1-208ENST00000518877 PHACTR3Q96KR7 559 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 MTFR1LQ9H019 292 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 ZKSCAN5Q9Y2L8 839 aa4.07□□□□□ -1.76
PCM1-208ENST00000518877 FAM83GA6ND36 823 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 DNAJC9-AS1A6NH13 148 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 TBKBP1A7MCY6 615 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 TGM5O43548 720 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 PRAMEF4O60810 478 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 RBMXL2O75526 392 aaKnown RBP4.06□□□□□ -1.76
PCM1-208ENST00000518877 SEC24DO94855 1032 aaPredicted RBP4.06□□□□□ -1.76
PCM1-208ENST00000518877 MATN4O95460 622 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 F2P00734 622 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 FOXF2Q12947 444 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 PABPC4Q13310 644 aaKnown RBP eCLIP4.06□□□□□ -1.76
PCM1-208ENST00000518877 LRRC32Q14392 662 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 SPDYE7PQ495Y7 208 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 ARMC6Q6NXE6 501 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 BTNL9Q6UXG8 535 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 KIF18BQ86Y91 864 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 PASD1Q8IV76 773 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 Q96MF0 132 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 DNAJC2Q99543 621 aaKnown RBP4.06□□□□□ -1.76
PCM1-208ENST00000518877 FDXACB1Q9BRP7 624 aaPredicted RBP4.06□□□□□ -1.76
PCM1-208ENST00000518877 MSRAQ9UJ68 235 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 ATP11BQ9Y2G3 1177 aa4.06□□□□□ -1.76
PCM1-208ENST00000518877 MAST3O60307 1309 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 SALL3Q9BXA9 1300 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 SIM1P81133 766 aaPredicted RBP4.05□□□□□ -1.76
PCM1-208ENST00000518877 DSG1Q02413 1049 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 ZNF169Q14929 603 aaPredicted RBP4.05□□□□□ -1.76
PCM1-208ENST00000518877 UBE3CQ15386 1083 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 ZBTB41Q5SVQ8 909 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 FAM102AQ5T9C2 384 aaPredicted RBP4.05□□□□□ -1.76
PCM1-208ENST00000518877 GLB1L2Q8IW92 636 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 NXPE1Q8N323 547 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 ZFP28Q8NHY6 868 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 SH3TC2Q8TF17 1288 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 SEMA4GQ9NTN9 838 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 IFT57Q9NWB7 429 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 LRIT1Q9P2V4 623 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 MAGEC2Q9UBF1 373 aaPredicted RBP4.05□□□□□ -1.76
PCM1-208ENST00000518877 NOX1Q9Y5S8 564 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 KAT6AQ92794 2004 aa4.05□□□□□ -1.76
PCM1-208ENST00000518877 A0A1W2PR48 441 aa4.04□□□□□ -1.76
PCM1-208ENST00000518877 MARCH11A6NNE9 402 aa4.04□□□□□ -1.76
PCM1-208ENST00000518877 ZNF891A8MT65 544 aaPredicted RBP4.04□□□□□ -1.76
PCM1-208ENST00000518877 IKBKBO14920 756 aa4.04□□□□□ -1.76
PCM1-208ENST00000518877 GAS7O60861 476 aa4.04□□□□□ -1.76
PCM1-208ENST00000518877 ASMTLO95671 621 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms