RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 PCP11498 1178 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 EPHA1P21709 976 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 MAP4P27816 1152 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 NDUFV1P49821 464 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 RBM10P98175 930 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 PGM5Q15124 567 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 SLC35G1Q2M3R5 365 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 FBXO47Q5MNV8 452 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 METTL7BQ6UX53 244 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 TBC1D10CQ8IV04 446 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 CMTR2Q8IYT2 770 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 LMBR1Q8WVP7 490 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 KLHDC7BQ96G42 594 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 GPATCH3Q96I76 525 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 YTHDC1Q96MU7 727 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 GPR20Q99678 358 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 USP26Q9BXU7 913 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 CHMP4BQ9H444 224 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 AGO3Q9H9G7 860 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 HELLSQ9NRZ9 838 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 BARX2Q9UMQ3 279 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 SUPT16HQ9Y5B9 1047 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 PCDHGC5Q9Y5F6 944 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 BAZ2BQ9UIF8 2168 aaKnown RBP6.96□□□□□ -1.3
PABPC1-207ENST00000518716 KAT6AQ92794 2004 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 FRMPD4Q14CM0 1322 aa6.96□□□□□ -1.3
PABPC1-207ENST00000518716 ZFHX4Q86UP3 3567 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 GHRP10912 638 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 GNAT1P11488 350 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 NRIP1P48552 1158 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 NT5C2P49902 561 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 MRPS9P82933 396 aaKnown RBP6.95□□□□□ -1.3
PABPC1-207ENST00000518716 BTG3Q14201 252 aaPredicted RBP6.95□□□□□ -1.3
PABPC1-207ENST00000518716 DUSP6Q16828 381 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 C11orf91Q3C1V1 193 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 SGO2Q562F6 1265 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 RRP12Q5JTH9 1297 aaKnown RBP6.95□□□□□ -1.3
PABPC1-207ENST00000518716 MARCH8Q5T0T0 291 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 C20orf194Q5TEA3 1177 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 CEP135Q66GS9 1140 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 SYCE2Q6PIF2 218 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 RUFY4Q6ZNE9 571 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 TMEM105Q8N8V8 129 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 RASGRP4Q8TDF6 673 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 POF1BQ8WVV4 589 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 RPGRIP1Q96KN7 1286 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 INPP4AQ96PE3 977 aaPredicted RBP6.95□□□□□ -1.3
PABPC1-207ENST00000518716 OSBPL1AQ9BXW6 950 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 NRCAMQ92823 1304 aa6.95□□□□□ -1.3
PABPC1-207ENST00000518716 KIAA1671Q9BY89 1806 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 MYH6P13533 1939 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 A0A0D9SFI3 127 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 SORBS3O60504 671 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 CFBP00751 764 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 MYCLP12524 364 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-207ENST00000518716 ID4P47928 161 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 ERVFC1P60507 584 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 UBE3AQ05086 875 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 CPSF6Q16630 551 aaKnown RBP eCLIP6.94□□□□□ -1.3
PABPC1-207ENST00000518716 MCMDC2Q4G0Z9 681 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 ASPRV1Q53RT3 343 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 TAF2Q6P1X5 1199 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 RBM23Q86U06 439 aaKnown RBP6.94□□□□□ -1.3
PABPC1-207ENST00000518716 ZNF589Q86UQ0 364 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-207ENST00000518716 NPAS4Q8IUM7 802 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 GIMAP7Q8NHV1 300 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 PPP2R3CQ969Q6 453 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 MYO19Q96H55 970 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 FAM227BQ96M60 508 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 CDCA3Q99618 268 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-207ENST00000518716 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 SENP7Q9BQF6 1050 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 AMNQ9BXJ7 453 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 MLXIPQ9HAP2 919 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 SH2B1Q9NRF2 756 aaPredicted RBP6.94□□□□□ -1.3
PABPC1-207ENST00000518716 SQORQ9Y6N5 450 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 NEDD4P46934 1319 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 CHD8Q9HCK8 2581 aa6.94□□□□□ -1.3
PABPC1-207ENST00000518716 CARNS1A5YM72 827 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 PER2O15055 1255 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 STAM2O75886 525 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 BRD1O95696 1058 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 ARP10275 920 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 CCND2P30279 289 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 HOXA13P31271 388 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-207ENST00000518716 HAND2P61296 217 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 ARHGAP4P98171 946 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 NEDD9Q14511 834 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 TRIP4Q15650 581 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-207ENST00000518716 CRTC2Q53ET0 693 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-207ENST00000518716 ANKRD54Q6NXT1 300 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 MFSD6Q6ZSS7 791 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 TSHZ1Q6ZSZ6 1077 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 CYFIP1Q7L576 1253 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 UBALD2Q8IYN6 164 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 ENAHQ8N8S7 591 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-207ENST00000518716 KREMEN2Q8NCW0 462 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 FLCNQ8NFG4 579 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 EVI5LQ96CN4 794 aa6.93□□□□□ -1.3
PABPC1-207ENST00000518716 ZKSCAN3Q9BRR0 538 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms