RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 GPC5P78333 572 aa12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 PARM1Q6UWI2 310 aa12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 CEP170P1Q96L14 293 aa12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 DDX23Q9BUQ8 820 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 NCOA5Q9HCD5 579 aaKnown RBP12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 UBN1Q9NPG3 1134 aa12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 VAV3Q9UKW4 847 aa12.68□□□□□ -0.38
CTNNA1-205ENST00000517904 ARID2Q68CP9 1835 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 MAP1BP46821 2468 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 CHD6Q8TD26 2715 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 KINO60870 393 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 ZMYND10O75800 440 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 C1RP00736 705 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 QARSP47897 775 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 SNW1Q13573 536 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 NPY5RQ15761 445 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 USP41Q3LFD5 358 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 FUT10Q6P4F1 479 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 SKAP1Q86WV1 359 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 RNF149Q8NC42 400 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 CNNM3Q8NE01 707 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 GSTCDQ8NEC7 633 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 RABGGTAQ92696 567 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 CPB2Q96IY4 423 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 NXF3Q9H4D5 531 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 FNIP2Q9P278 1114 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 PCDHA4Q9UN74 947 aa12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 MTF2Q9Y483 593 aaPredicted RBP12.67□□□□□ -0.38
CTNNA1-205ENST00000517904 KANSL1LA0AUZ9 987 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 ZBTB39O15060 712 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 ERLIN2O94905 339 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 FSHRP23945 695 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 RFC5P40937 340 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 NTHL1P78549 312 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 PPP2R5CQ13362 524 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 EMC2Q15006 297 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 ZNF528Q3MIS6 628 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 BMP2KLQ5H9B9 411 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 RTP2Q5QGT7 225 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 MOXD1Q6UVY6 613 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 PRSS55Q6UWB4 352 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 GRASPQ7Z6J2 395 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 FERMT3Q86UX7 667 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 GPR65Q8IYL9 337 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 FBXL16Q8N461 479 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 SHDQ96IW2 340 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 JAKMIP1Q96N16 626 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 APOL6Q9BWW8 343 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 SPATA6Q9NWH7 488 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 CACNG4Q9UBN1 327 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 DDX25Q9UHL0 483 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 ADAM28Q9UKQ2 775 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 FBXO4Q9UKT5 387 aa12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 ZFP37Q9Y6Q3 630 aaPredicted RBP12.66□□□□□ -0.38
CTNNA1-205ENST00000517904 USP24Q9UPU5 2620 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 SPTLC1O15269 473 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 NR1I2O75469 434 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 AKAP5P24588 427 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 PDIA3P30101 505 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 YWHABP31946 246 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 PTENP60484 403 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 MLF2Q15773 248 aaPredicted RBP12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 AMHR2Q16671 573 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 INF2Q27J81 1249 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 NOTUMQ6P988 496 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 EXOC8Q8IYI6 725 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 BLIDQ8IZY5 108 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 FGF13Q92913 245 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 KCNB2Q92953 911 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 PAAF1Q9BRP4 392 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 LXNQ9BS40 222 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 COLEC11Q9BWP8 271 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 CSRNP2Q9H175 543 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 KCNMB3Q9NPA1 279 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 NCDNQ9UBB6 729 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 FBXW11Q9UKB1 542 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 CDH7Q9ULB5 785 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 PPME1Q9Y570 386 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 NOTCH4Q99466 2003 aa12.65□□□□□ -0.38
CTNNA1-205ENST00000517904 INO80B-WBP1J3KQ70 363 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 B4GALT5O43286 388 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 LAMTOR5O43504 91 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 ARF4P18085 180 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 CD72P21854 359 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 AXLP30530 894 aa12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 ATXN1P54253 815 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-205ENST00000517904 PRKCQQ04759 706 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms