RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 LRRC4Q9HBW1 653 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 BLOC1S4Q9NUP1 217 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 SIPA1L3O60292 1781 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 CNTNAP4Q9C0A0 1308 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 PODXLO00592 558 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 MCF2LO15068 1137 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 RASSF2P50749 326 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 HMGCS2P54868 508 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 ZNF844Q08AG5 666 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 ALCAMQ13740 583 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 TMED2Q15363 201 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 MAPK6Q16659 721 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 TSNAXIP1Q2TAA8 658 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 RHOT2Q8IXI1 618 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 ABI1Q8IZP0 508 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 BAP1Q92560 729 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 C11orf70Q9BRQ4 267 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
PCDHGA1-202ENST00000517417 CCT8L1PA6NM43 557 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 KIF22Q14807 665 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 TRADDQ15628 312 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 PPP6R3Q5H9R7 873 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 KIAA1755Q5JYT7 1200 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLFN12LQ6IEE8 588 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 PPP1R18Q6NYC8 613 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 CDC42EP5Q6NZY7 148 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 C4orf50Q6ZRC1 276 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 CATSPER4Q7RTX7 472 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 EXOC8Q8IYI6 725 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 GLIS3Q8NEA6 775 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 CCHCR1Q8TD31 782 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 THOC1Q96FV9 657 aaKnown RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 KRT76Q01546 638 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 RPS6KA2Q15349 733 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 PRAMEF18Q5VWM3 479 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 GJB7Q6PEY0 223 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ZNF571Q7Z3V5 609 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 AFAP1L2Q8N4X5 818 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 C3orf20Q8ND61 904 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ACTRT1Q8TDG2 376 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 OTUD5Q96G74 571 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ATP6V0A4Q9HBG4 840 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 WDR70Q9NW82 654 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 SUCLA2Q9P2R7 463 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 CLGNO14967 610 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ADAMTS3O15072 1205 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ITGA4P13612 1032 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 SOX5P35711 763 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 VAMP7P51809 220 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ARPP19P56211 112 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ITGB3BPQ13352 177 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 EDRF1Q3B7T1 1238 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ZNF667Q5HYK9 610 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 SWT1Q5T5J6 900 aaKnown RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 OR6B3Q8NGW1 331 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 ECT2Q9H8V3 914 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 FNDC3AQ9Y2H6 1198 aaKnown RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 WDR91A4D1P6 747 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 PRPSAP2O60256 369 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 DHX34Q14147 1143 aaKnown RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 LMBRD2Q68DH5 695 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 INTS5Q6P9B9 1019 aaKnown RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 CD302Q8IX05 232 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 RPUSD2Q8IZ73 545 aaKnown RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 FAM81BQ96LP2 452 aa11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 HERC5Q9UII4 1024 aaKnown RBP11.55□□□□□ -0.56
PCDHGA1-202ENST00000517417 TNS2Q63HR2 1409 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 MIF4GDA9UHW6 222 aaKnown RBP11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 EVI5O60447 810 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 FTLP02792 175 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 ANKRD20A8PQ5CZ79 823 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 IQCKQ8N0W5 287 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 GSDMBQ8TAX9 411 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 SALL4Q9UJQ4 1053 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 LAMA4Q16363 1823 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 CFAP73A6NFT4 308 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 MED7O43513 233 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 MYBP10242 640 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 CHRNA3P32297 505 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 SESN3P58005 492 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 IL9RQ01113 521 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 RNASELQ05823 741 aaKnown RBP11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 CCDC137Q6PK04 289 aaKnown RBP11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 HAUS6Q7Z4H7 955 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 MREGQ8N565 214 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 MCUQ8NE86 351 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 CDKL2Q92772 493 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 SLC4A9Q96Q91 983 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 CRAMP1Q96RY5 1269 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 ESYT2A0FGR8 921 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 PDXKO00764 312 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 GSTA1P08263 222 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 GSTA2P09210 222 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 ARL4AP40617 200 aa11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 KCTD19Q17RG1 926 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA1-202ENST00000517417 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms