RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 STC2O76061 302 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 LTFP02788 710 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 CFC1BP0CG36 223 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 CFC1P0CG37 223 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 PKMP14618 531 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 FAHP16930 419 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 POLR2BP30876 1174 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 ME1P48163 572 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 EPHA5P54756 1037 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 IL13RA1P78552 427 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 NHLH2Q02577 135 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 LTBQ06643 244 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 EMC4Q5J8M3 183 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 KRT40Q6A162 431 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 OTUD7BQ6GQQ9 843 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 TTBK2Q6IQ55 1244 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 CATSPERGQ6ZRH7 1159 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 CEP68Q76N32 757 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 ADIPOR2Q86V24 386 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 TRIM48Q8IWZ4 208 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 GLB1L3Q8NCI6 653 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 OR52N2Q8NGI0 321 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 TTLL11Q8NHH1 800 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 PPP1R14CQ8TAE6 165 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 GCDHQ92947 438 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 CUL5Q93034 780 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 MIB2Q96AX9 1013 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 PTCD3Q96EY7 689 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZNF668Q96K58 619 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 C5orf34Q96MH7 638 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 TRMT61BQ9BVS5 477 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 CPEB1Q9BZB8 566 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 SENP6Q9GZR1 1112 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 MYLK2Q9H1R3 596 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 EPC1Q9H2F5 836 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 SLC39A2Q9NP94 309 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 PRDM8Q9NQV8 689 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 CXXC1Q9P0U4 656 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 KLHL13Q9P2N7 655 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 NCDNQ9UBB6 729 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZNF282Q9UDV7 671 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 WWC3Q9ULE0 1092 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 ST3GAL5Q9UNP4 418 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 NOX1Q9Y5S8 564 aa-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 RBM8AQ9Y5S9 174 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZNF646O15015 1829 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 AURKAO14965 403 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 HOXA3O43365 443 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 EDIL3O43854 480 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 MAFKO60675 156 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 DNAJA2O60884 412 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 DNAJB5O75953 348 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 ELFN1P0C7U0 828 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 NHLRC4P0CG21 123 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 PRKCSHP14314 528 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 FOLR3P41439 243 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 RBM25P49756 843 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 ADAM8P78325 824 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 TSNAXIP1Q2TAA8 658 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 KRTAP13-4Q3LI77 160 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 PAN2Q504Q3 1202 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 ARSHQ5FYA8 562 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 METTL24Q5JXM2 366 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 MBLAC2Q68D91 279 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 KLHDC10Q6PID8 442 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 RTL10Q7L3V2 364 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 CXXC5Q7LFL8 322 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 CTU1Q7Z7A3 348 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZNF584Q8IVC4 421 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 AMER3Q8N944 861 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 C3orf58Q8NDZ4 430 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 PJA1Q8NG27 643 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 FAM222BQ8WU58 562 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZC3H10Q96K80 434 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 AARSD1Q9BTE6 412 aaKnown RBP-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 SMOC1Q9H4F8 434 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 ACSS2Q9NR19 701 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 NLRP2Q9NX02 1062 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 FNIP2Q9P278 1114 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 SEPT3Q9UH03 358 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 PPM1HQ9ULR3 514 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 X6R8D5 127 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 WDR17Q8IZU2 1322 aa-0.38□□□□□ -2.47
SNORA40.16-201ENST00000517238 KIR2DL5BA0A0G2JN68 375 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 KIR2DL5BA0A0G2JPC4 375 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 LINC00473A8K010 186 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 GCOM1H8Y6P7 765 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 FZD6O60353 706 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 CFIP05156 583 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 HNRNPCP07910 306 aaKnown RBP eCLIP-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 PRB4P10163 310 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 CYP19A1P11511 503 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 ZNF26P17031 533 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 ATP5F1P24539 256 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 PMP22Q01453 160 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 DSC2Q02487 901 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 TCIRG1Q13488 830 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 PEX6Q13608 980 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 SPIDRQ14159 915 aa-0.39□□□□□ -2.47
SNORA40.16-201ENST00000517238 FAM166AQ6J272 317 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms