RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 COL6A2P12110 1019 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 CD19P15391 556 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 GARTP22102 1010 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 FOLR3P41439 243 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 GRIA3P42263 894 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ECE1P42892 770 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 GZMKP49863 264 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 FAM160A1Q05DH4 1040 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZYXQ15942 572 aaKnown RBP0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZNF618Q5T7W0 954 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ARMC6Q6NXE6 501 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 MEX3BQ6ZN04 569 aaKnown RBP0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 OTOP3Q7RTS5 596 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 TMC7Q7Z402 723 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 PIP4P1Q86T03 277 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 FAM83AQ86UY5 434 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 XYLT1Q86Y38 959 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 RASAL3Q86YV0 1011 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 VSIG10Q8N0Z9 540 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 LILRB2Q8N423 598 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 GALNT16Q8N428 558 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 LNX2Q8N448 690 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 GOLM1Q8NBJ4 401 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 FBF1Q8TES7 1133 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 NUDCD2Q8WVJ2 157 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 DIO2Q92813 273 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 KLHL25Q9H0H3 589 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ENKD1Q9H0I2 346 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 FAM234AQ9H0X4 552 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 OR10A5Q9H207 317 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZNF408Q9H9D4 720 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZNF556Q9HAH1 456 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ACSS2Q9NR19 701 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 PDGFCQ9NRA1 345 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 BTBD7Q9P203 1132 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 SEMA5BQ9P283 1151 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 MAGEL2Q9UJ55 1249 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 WWC3Q9ULE0 1092 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 ST3GAL5Q9UNP4 418 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 USP15Q9Y4E8 981 aaPredicted RBP0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 PCDHB1Q9Y5F3 818 aa0.09□□□□□ -2.4
RNU6-542P-201ENST00000516405 KMT2DO14686 5537 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 FAM90A27PA6NNH2 459 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 LDB3O75112 727 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZNF883P0CG24 379 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 RLBP1P12271 317 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 CRKP46108 304 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 KCNJ5P48544 419 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 CRIP2P52943 208 aaPredicted RBP0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 DSCR10P59022 87 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 SF1Q15637 639 aaKnown RBP0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 MEI1Q5TIA1 1274 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 KAZNQ674X7 775 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 SPINK14Q6IE38 97 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 FAM196AQ6ZSG2 479 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 KCTD1Q719H9 257 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 GLYCTKQ8IVS8 523 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 LYG1Q8N1E2 194 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 TMEM132CQ8N3T6 1108 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 PLA2G15Q8NCC3 412 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 LMO3Q8TAP4 145 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 NACC2Q96BF6 587 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 RCC1LQ96I51 464 aaKnown RBP0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 FGD4Q96M96 766 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 HAUS7Q99871 368 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 TMEM204Q9BSN7 226 aa0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 PPARGC1AQ9UBK2 798 aaKnown RBP0.08□□□□□ -2.4
RNU6-542P-201ENST00000516405 LINC00473A8K010 186 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 PRRT4C9JH25 899 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 MYO1FO00160 1098 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 KCNH1O95259 989 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 JUNP05412 331 aaKnown RBP0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 ITGAVP06756 1048 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 SPATA31D3P0C874 917 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 MYF6P23409 242 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 RBM25P49756 843 aaKnown RBP0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 ANTXR2P58335 489 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 KEAP1Q14145 624 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 KIZQ2M2Z5 673 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 HABP4Q5JVS0 413 aaKnown RBP0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 C10orf25Q5T742 122 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 DAB2IPQ5VWQ8 1189 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 KHDRBS2Q5VWX1 349 aaKnown RBP0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 ZDHHC20Q5W0Z9 365 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 KRT40Q6A162 431 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 DNAJC14Q6Y2X3 702 aaPredicted RBP0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 CATSPERGQ6ZRH7 1159 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 GK5Q6ZS86 529 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 SPATA31D4Q6ZUB0 917 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 ADAT2Q7Z6V5 191 aaKnown RBP0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 SH3RF2Q8TEC5 729 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 TFAP2BQ92481 460 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 GFM2Q969S9 779 aaKnown RBP0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 PTCD3Q96EY7 689 aaKnown RBP0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 MMS19Q96T76 1030 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 MTFR1LQ9H019 292 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 SPON1Q9HCB6 807 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 TMEM74BQ9NUR3 256 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 POT1Q9NUX5 634 aa0.07□□□□□ -2.4
RNU6-542P-201ENST00000516405 UCKL1Q9NWZ5 548 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms