RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 IFT122Q9HBG6 1241 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NLRC4Q9NPP4 1024 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 XPNPEP3Q9NQH7 507 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KCND1Q9NSA2 647 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DAAM1Q9Y4D1 1078 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CITO14578 2027 aa8.3□□□□□ -1.08
SCARNA20.1-201ENST00000516009 C17orf102A2RUQ5 167 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MBLAC1A4D2B0 266 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 LRRC53A6NM62 1247 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TTLL13PA6NNM8 815 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 LRRIQ3A6PVS8 624 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 OGTO15294 1046 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PMM2O15305 246 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZSCAN12O43309 604 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ADAMTS4O75173 837 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CCDC175P0C221 793 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DLATP10515 647 aaKnown RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ACTN1P12814 892 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 UCHL3P15374 230 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 HNRNPH3P31942 346 aaKnown RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GTF2H1P32780 548 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GCLMP48507 274 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CDK17Q00537 523 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 APBA1Q02410 837 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PPP3CAQ08209 521 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PSMD6Q15008 389 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MEA1Q16626 185 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FAM187BQ17R55 369 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZNF568Q3ZCX4 644 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 C1orf220Q5T0J3 134 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MAP3K21Q5TCX8 1036 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KLHDC7AQ5VTJ3 777 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SFMBT2Q5VUG0 894 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KRT39Q6A163 491 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TRIM65Q6PJ69 517 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 WDR59Q6PJI9 974 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MPZL3Q6UWV2 235 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CXCL17Q6UXB2 119 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RAD9BQ6WBX8 426 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SRGAP1Q7Z6B7 1085 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZBTB33Q86T24 672 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 EHBP1Q8NDI1 1231 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PLEKHO2Q8TD55 490 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PPP1R13LQ8WUF5 828 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZNF296Q8WUU4 475 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SYN2Q92777 582 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PRIMPOLQ96LW4 560 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SPAG5Q96R06 1193 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FNBP1Q96RU3 617 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PPP1R16BQ96T49 567 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CHP1Q99653 195 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GCOM2Q9BZD3 368 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 HAPLN2Q9GZV7 340 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MINDY3Q9H8M7 445 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SIX2Q9NPC8 291 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TRMT1Q9NXH9 659 aaKnown RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RBAKQ9NYW8 714 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 APEX2Q9UBZ4 518 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 FBXL5Q9UKA1 691 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MYO6Q9UM54 1294 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PLAGL2Q9UPG8 496 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TNFSF13BQ9Y275 285 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 EPN1Q9Y6I3 576 aaPredicted RBP8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CNTNAP2Q9UHC6 1331 aa8.29□□□□□ -1.08
SCARNA20.1-201ENST00000516009 GOLGA6L9A6NEM1 432 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 USP27XA6NNY8 438 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ABLIM1O14639 778 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TREHO43280 583 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 B4GALT5O43286 388 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ERLIN2O94905 339 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 IPO7O95373 1038 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MYCNP04198 464 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TNNI1P19237 187 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RFX1P22670 979 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 PROZP22891 400 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CYLC1P35663 651 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CLDN10P78369 228 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ADAM17P78536 824 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MAP2K1Q02750 393 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MCL1Q07820 350 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 NCBP1Q09161 790 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TMEM62Q0P6H9 643 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RAPGEF1Q13905 1077 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 MTF1Q14872 753 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SURF1Q15526 300 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ASIC2Q16515 512 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 KIZQ2M2Z5 673 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 SLC9C1Q4G0N8 1177 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 EPC2Q52LR7 807 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DNTTIP2Q5QJE6 756 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 IQCEQ6IPM2 695 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 DPY19L2P1Q6NXN4 242 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TAF2Q6P1X5 1199 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CRELD2Q6UXH1 353 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 RUFY4Q6ZNE9 571 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 TOGARAM2Q6ZUX3 1019 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 BRSK2Q8IWQ3 736 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 CCDC170Q8IYT3 715 aa8.28□□□□□ -1.08
SCARNA20.1-201ENST00000516009 ZNF710Q8N1W2 664 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms