RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 COILP38432 576 aaPredicted RBP13.87□□□□□ -0.19
PHF3-212ENST00000515594 PRELPP51888 382 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 GPC5P78333 572 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 DGKZQ13574 1117 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 SEL1L2Q5TEA6 688 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 NUGGCQ68CJ6 796 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 CBWD2Q8IUF1 395 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 ZNF564Q8TBZ8 553 aaPredicted RBP13.87□□□□□ -0.19
PHF3-212ENST00000515594 MKL1Q969V6 931 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 ZNF653Q96CK0 615 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 GLIS2Q9BZE0 524 aaPredicted RBP13.87□□□□□ -0.19
PHF3-212ENST00000515594 CNOT10Q9H9A5 744 aaKnown RBP13.87□□□□□ -0.19
PHF3-212ENST00000515594 SAMD15Q9P1V8 674 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 ASIC3Q9UHC3 531 aa13.87□□□□□ -0.19
PHF3-212ENST00000515594 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 SLC16A4O15374 487 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 HOXA7P31268 230 aaPredicted RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 ELF1P32519 619 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 NF2P35240 595 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 VAMP7P51809 220 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 KRT17Q04695 432 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 MYO1EQ12965 1108 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 DHX34Q14147 1143 aaKnown RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 LACTB2Q53H82 288 aaPredicted RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 RNF207Q6ZRF8 634 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 CAPN12Q6ZSI9 719 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 TRPM8Q7Z2W7 1104 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 SLC13A5Q86YT5 568 aaPredicted RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 UBL4BQ8N7F7 174 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 CCDC63Q8NA47 563 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 MRRFQ96E11 262 aaKnown RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 PGM2Q96G03 612 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 RASAL2Q9UJF2 1139 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 R3HDM2Q9Y2K5 976 aaKnown RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 FAM187AA6NFU0 413 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 SRRM3A6NNA2 597 aaPredicted RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 RGL2O15211 777 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 PIAS1O75925 651 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 CTNNA2P26232 953 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 DRP2Q13474 957 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 LMBRD2Q68DH5 695 aaPredicted RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 PADI6Q6TGC4 694 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 PIGWQ7Z7B1 504 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 ARHGEF2Q92974 986 aaKnown RBP13.86□□□□□ -0.19
PHF3-212ENST00000515594 TMEM117Q9H0C3 514 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 GLT8D2Q9H1C3 349 aa13.86□□□□□ -0.19
PHF3-212ENST00000515594 TCP10L2B9ZVM9 353 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 SORBS3O60504 671 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 CHRNA3P32297 505 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 NEDD9Q14511 834 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 VPS72Q15906 364 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 CSRNP1Q96S65 589 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 NAP1L3Q99457 506 aaPredicted RBP13.85□□□□□ -0.19
PHF3-212ENST00000515594 TACO1Q9BSH4 297 aaKnown RBP13.85□□□□□ -0.19
PHF3-212ENST00000515594 WDR11Q9BZH6 1224 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 KLHL11Q9NVR0 708 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 ZNF831Q5JPB2 1677 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 GJB6O95452 261 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 FOSP01100 380 aaPredicted RBP13.85□□□□□ -0.19
PHF3-212ENST00000515594 HOXA10P31260 410 aaPredicted RBP13.85□□□□□ -0.19
PHF3-212ENST00000515594 FMO1Q01740 532 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 RBM26Q5T8P6 1007 aaKnown RBP13.85□□□□□ -0.19
PHF3-212ENST00000515594 TMEM179Q6ZVK1 233 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 ANKS4BQ8N8V4 417 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 C9orf72Q96LT7 481 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 RMDN2Q96LZ7 410 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 KDM4CQ9H3R0 1056 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 HOMER2Q9NSB8 354 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 MTRF1LQ9UGC7 380 aaKnown RBP13.85□□□□□ -0.19
PHF3-212ENST00000515594 NOCTQ9UK39 431 aaKnown RBP13.85□□□□□ -0.19
PHF3-212ENST00000515594 USP21Q9UK80 565 aa13.85□□□□□ -0.19
PHF3-212ENST00000515594 IPO5O00410 1097 aaKnown RBP13.84□□□□□ -0.19
PHF3-212ENST00000515594 MGRN1O60291 552 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 SPP2Q13103 211 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 MTM1Q13496 603 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 PLA2G4FQ68DD2 849 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 HHIPL2Q6UWX4 724 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 VSTM1Q6UX27 236 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 FAM47EQ6ZV65 393 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 RHOT2Q8IXI1 618 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 SPOCK2Q92563 424 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 UPP2O95045 317 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 BCRP11274 1271 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 ITGB5P18084 799 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 ANXA13P27216 316 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 STAT2P52630 851 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 PEX3P56589 373 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 CEP55Q53EZ4 464 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 AGAP11Q8TF27 550 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 PRMT6Q96LA8 375 aaPredicted RBP13.84□□□□□ -0.19
PHF3-212ENST00000515594 PAIP2Q9BPZ3 127 aaKnown RBP13.84□□□□□ -0.19
PHF3-212ENST00000515594 MKNK1Q9BUB5 465 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 PCYOX1Q9UHG3 505 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 SLC12A4Q9UP95 1085 aa13.84□□□□□ -0.19
PHF3-212ENST00000515594 RBBP6Q7Z6E9 1792 aaKnown RBP13.84□□□□□ -0.19
PHF3-212ENST00000515594 SNX3O60493 162 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms