RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 PRKCBP05771 671 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 URODP06132 367 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 PRPHP41219 470 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 MTHFRP42898 656 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 EFNA5P52803 228 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 PTPN14Q15678 1187 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 KIAA1841Q6NSI8 718 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 IGSF22Q8N9C0 903 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 TSHZ2Q9NRE2 1034 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 DAXXQ9UER7 740 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-215ENST00000515516 PLXNA4Q9HCM2 1894 aa15.09■□□□□ 0.01
TCOF1-215ENST00000515516 ACKR2O00590 384 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 C2CD2LO14523 706 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 B4GALT3O60512 393 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 GRIK3Q13003 919 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 ZRSR1Q15695 479 aaKnown RBP15.08■□□□□ 0
TCOF1-215ENST00000515516 ECM1Q16610 540 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 ATAT1Q5SQI0 421 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 RARS2Q5T160 578 aaKnown RBP15.08■□□□□ 0
TCOF1-215ENST00000515516 ELMSAN1Q6PJG2 1045 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 ZBTB33Q86T24 672 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 BSNDQ8WZ55 320 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 EDAQ92838 391 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 FAM122AQ96E09 287 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 KLHL5Q96PQ7 755 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 HERC2P3Q9BVR0 1158 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.08■□□□□ 0
TCOF1-215ENST00000515516 MIOSQ9NXC5 875 aa15.08■□□□□ 0
TCOF1-215ENST00000515516 CCDC169A6NNP5 214 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 K7ERI5 159 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 TADA2AO75478 443 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 EPCAMP16422 314 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 DSC1Q08554 894 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 C12orf76Q8N812 135 aaPredicted RBP15.07■□□□□ 0
TCOF1-215ENST00000515516 SLC22A17Q8WUG5 538 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 MFSD14AQ96MC6 490 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 FBXL18Q96ME1 805 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 VN1R3Q9BXE9 311 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 PDZD7Q9H5P4 517 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 POLD4Q9HCU8 107 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 DPP7Q9UHL4 492 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 ARIH1Q9Y4X5 557 aaPredicted RBP15.07■□□□□ 0
TCOF1-215ENST00000515516 ZMYM2Q9UBW7 1377 aa15.07■□□□□ 0
TCOF1-215ENST00000515516 E9PMD0 336 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 ADH1AP07327 375 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 CNPP09543 421 aaKnown RBP15.06■□□□□ 0
TCOF1-215ENST00000515516 SP100P23497 879 aaPredicted RBP15.06■□□□□ 0
TCOF1-215ENST00000515516 GLUD2P49448 558 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 DMP1Q13316 513 aaPredicted RBP15.06■□□□□ 0
TCOF1-215ENST00000515516 DCAF4L1Q3SXM0 396 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
TCOF1-215ENST00000515516 CDK5RAP3Q96JB5 506 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 DRC1Q96MC2 740 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 TBC1D32Q96NH3 1257 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 KIFC3Q9BVG8 833 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 CCDC113Q9H0I3 377 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 SFXN1Q9H9B4 322 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 MARCH5Q9NX47 278 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 SNTG2Q9NY99 539 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 KCNG1Q9UIX4 513 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 PHLPP2Q6ZVD8 1323 aa15.06■□□□□ 0
TCOF1-215ENST00000515516 PP2D1A8MPX8 630 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 THP07101 528 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 CDC25AP30304 524 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 CLCN4P51793 760 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 PEX3P56589 373 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 ZXDAP98168 799 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 ATP2C1P98194 919 aaPredicted RBP15.05■□□□□ -0
TCOF1-215ENST00000515516 IL17AQ16552 155 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 USP41Q3LFD5 358 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 ATF7IP2Q5U623 682 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 TAS1R1Q7RTX1 841 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 KCTD17Q8N5Z5 321 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 TIPINQ9BVW5 301 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 NT5C3AQ9H0P0 336 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.05■□□□□ -0
TCOF1-215ENST00000515516 ADAM28Q9UKQ2 775 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 ATG2AQ2TAZ0 1938 aa15.05■□□□□ -0
TCOF1-215ENST00000515516 VWA3AA6NCI4 1184 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 LILRB3O75022 631 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 HIP1RO75146 1068 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 RECQL4O94761 1208 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 CD2BP2O95400 341 aaKnown RBP15.04■□□□□ -0
TCOF1-215ENST00000515516 WEE2P0C1S8 567 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 DSG1Q02413 1049 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 CREMQ03060 361 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 TUSC3Q13454 348 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 HSP90AA2PQ14568 343 aaPredicted RBP15.04■□□□□ -0
TCOF1-215ENST00000515516 KIAA0319Q5VV43 1072 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 ARL6IP4Q66PJ3 421 aaKnown RBP15.04■□□□□ -0
TCOF1-215ENST00000515516 FUT10Q6P4F1 479 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 TMC5Q6UXY8 1006 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 TRIM67Q6ZTA4 783 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 GSTCDQ8NEC7 633 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 POMKQ9H5K3 350 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 C17orf75Q9HAS0 396 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 KMT5AQ9NQR1 393 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 USP20Q9Y2K6 914 aa15.04■□□□□ -0
TCOF1-215ENST00000515516 GDAQ9Y2T3 454 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms