RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ARHGAP24Q8N264 748 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 PNMA1Q8ND90 353 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMAD1-215ENST00000515385 SNX29Q8TEQ0 813 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 C10orf82Q8WW14 230 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 NRG4Q8WWG1 115 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 BTBD10Q9BSF8 475 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 PREBQ9HCU5 417 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 TBC1D30Q9Y2I9 924 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 UMODL1Q5DID0 1318 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 RGPD5Q99666 1765 aa13.69□□□□□ -0.22
SMAD1-215ENST00000515385 ANKRD62A6NC57 917 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 NMT2O60551 498 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 ACSL3O95573 720 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 ASMTLO95671 621 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 XRCC5P13010 732 aaKnown RBP13.68□□□□□ -0.22
SMAD1-215ENST00000515385 NAPAP54920 295 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 SBK1Q52WX2 424 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 TNS2Q63HR2 1409 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 TTC27Q6P3X3 843 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 LMOD2Q6P5Q4 547 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 FAM47EQ6ZV65 393 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 ST13P4Q8IZP2 240 aaPredicted RBP13.68□□□□□ -0.22
SMAD1-215ENST00000515385 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
SMAD1-215ENST00000515385 IRGQQ8WZA9 623 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 ALG3Q92685 438 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 HIC2Q96JB3 615 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 EMILIN3Q9NT22 766 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 MAD2L2Q9UI95 211 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 ZNF510Q9Y2H8 683 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 PRPF4O43172 522 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMAD1-215ENST00000515385 BCAMP50895 628 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 PDK4Q16654 411 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 TAF1BQ53T94 588 aaPredicted RBP13.68□□□□□ -0.22
SMAD1-215ENST00000515385 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 FYB2Q5VWT5 728 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 CCDC174Q6PII3 467 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 RHBDF2Q6PJF5 856 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 PROSER2Q86WR7 435 aaPredicted RBP13.68□□□□□ -0.22
SMAD1-215ENST00000515385 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 SDR16C5Q8N3Y7 309 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 ZSWIM1Q9BR11 485 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 UBA5Q9GZZ9 404 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 WNT8AQ9H1J5 351 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
SMAD1-215ENST00000515385 DNAJB4Q9UDY4 337 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
SMAD1-215ENST00000515385 TRAF3IP3Q9Y228 551 aa13.68□□□□□ -0.22
SMAD1-215ENST00000515385 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 PAPPAQ13219 1627 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SLC16A3O15427 465 aaKnown RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 CBX6O95503 412 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 PABPC4LP0CB38 370 aaKnown RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 NR2F2P24468 414 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 MAN1A1P33908 653 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SOX5P35711 763 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 MARK2Q7KZI7 788 aaKnown RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 DNAAF5Q86Y56 855 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SYNE4Q8N205 404 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 TBCKQ8TEA7 893 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 CADM1Q9BY67 442 aaKnown RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 LRRC19Q9H756 370 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SIX2Q9NPC8 291 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 AAASQ9NRG9 546 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SENP1Q9P0U3 644 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 NAALADL1Q9UQQ1 740 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 ALG6Q9Y672 507 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 KDM3AQ9Y4C1 1321 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 MYH3P11055 1940 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SMIM31A0A1B0GVY4 71 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 PALM3A6NDB9 673 aaPredicted RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 GSC2O15499 205 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 TPD52L2O43399 206 aaKnown RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 THAP12O43422 761 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 CALUO43852 315 aaPredicted RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 WDR4P57081 412 aaKnown RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 ITGA9Q13797 1035 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 MYBPC2Q14324 1141 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 KCTD19Q17RG1 926 aaPredicted RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 TMEM259Q4ZIN3 620 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 ACSBG2Q5FVE4 666 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SRRM1Q8IYB3 904 aaKnown RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 WDR66Q8TBY9 1149 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 SCFD1Q8WVM8 642 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 YIPF2Q9BWQ6 316 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 EPB41L1Q9H4G0 881 aa13.67□□□□□ -0.22
SMAD1-215ENST00000515385 TRMT112Q9UI30 125 aaKnown RBP13.67□□□□□ -0.22
SMAD1-215ENST00000515385 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 F8W8V4 182 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 ATP9BO43861 1147 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 PFDN1O60925 122 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 TBX10O75333 385 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 KRT36O76013 467 aa13.66□□□□□ -0.22
SMAD1-215ENST00000515385 CEBPAP49715 358 aaPredicted RBP13.66□□□□□ -0.22
SMAD1-215ENST00000515385 SCNN1BP51168 640 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms