RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 C1orf112Q9NSG2 853 aa22.93■■□□□ 1.26
LSM6-207ENST00000515311 EFCAB14O75071 495 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 NR3C1P04150 777 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 SKIP12755 728 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 RPL13P26373 211 aaKnown RBP22.92■■□□□ 1.26
LSM6-207ENST00000515311 MATR3P43243 847 aaKnown RBP eCLIP22.92■■□□□ 1.26
LSM6-207ENST00000515311 IKBKEQ14164 716 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 HSP90AA2PQ14568 343 aaPredicted RBP22.92■■□□□ 1.26
LSM6-207ENST00000515311 KYAT1Q16773 422 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 TCTN1Q2MV58 587 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 SLC24A5Q71RS6 500 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 LINC01599Q8WXQ3 324 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 BPIFA3Q9BQP9 254 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 CBWD1Q9BRT8 395 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 TRIM6Q9C030 488 aaPredicted RBP22.92■■□□□ 1.26
LSM6-207ENST00000515311 DMAC2Q9NW81 257 aa22.92■■□□□ 1.26
LSM6-207ENST00000515311 A0A0U1RQF3 1178 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 ABHD14A-ACY1A0A1B0GW23 586 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 TRIM49BA6NDI0 452 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 OGTO15294 1046 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 ZNF623O75123 536 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 BAIAP3O94812 1187 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 NPTXRO95502 500 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 ACTN1P12814 892 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 PSRC1Q6PGN9 363 aaPredicted RBP22.91■■□□□ 1.26
LSM6-207ENST00000515311 ZBTB33Q86T24 672 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 RTN4RL1Q86UN2 441 aaPredicted RBP22.91■■□□□ 1.26
LSM6-207ENST00000515311 ZC3H3Q8IXZ2 948 aaKnown RBP22.91■■□□□ 1.26
LSM6-207ENST00000515311 MED15Q96RN5 788 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 EIF2AQ9BY44 585 aaKnown RBP22.91■■□□□ 1.26
LSM6-207ENST00000515311 FAM105AQ9NUU6 356 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 HSPBP1Q9NZL4 362 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 AGO2Q9UKV8 859 aaKnown RBP22.91■■□□□ 1.26
LSM6-207ENST00000515311 PCDHB2Q9Y5E7 798 aa22.91■■□□□ 1.26
LSM6-207ENST00000515311 C9IYK1 514 aa22.9■■□□□ 1.26
LSM6-207ENST00000515311 RBAK-RBAKDNI3L0D1 243 aa22.9■■□□□ 1.26
LSM6-207ENST00000515311 CLIC2O15247 247 aa22.9■■□□□ 1.26
LSM6-207ENST00000515311 FAM189A1O60320 539 aa22.9■■□□□ 1.26
LSM6-207ENST00000515311 NR2F2P24468 414 aa22.9■■□□□ 1.26
LSM6-207ENST00000515311 C16orf59Q7L2K0 433 aa22.9■■□□□ 1.26
LSM6-207ENST00000515311 DUSP9Q99956 384 aaKnown RBP22.9■■□□□ 1.26
LSM6-207ENST00000515311 KIAA1586Q9HCI6 787 aa22.9■■□□□ 1.26
LSM6-207ENST00000515311 RNF216Q9NWF9 866 aaPredicted RBP22.9■■□□□ 1.26
LSM6-207ENST00000515311 ENPP3O14638 875 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 TNRC18O15417 2968 aaPredicted RBP22.89■■□□□ 1.25
LSM6-207ENST00000515311 LDHAP00338 332 aaKnown RBP22.89■■□□□ 1.25
LSM6-207ENST00000515311 ACRP10323 421 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 GRM5P41594 1212 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 CYP2J2P51589 502 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 STX17P56962 302 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 FAM189BP81408 668 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 FKBP3Q00688 224 aaKnown RBP22.89■■□□□ 1.25
LSM6-207ENST00000515311 MRPL10Q7Z7H8 261 aaKnown RBP22.89■■□□□ 1.25
LSM6-207ENST00000515311 HACE1Q8IYU2 909 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 CSGALNACT2Q8N6G5 542 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 XXYLT1Q8NBI6 393 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 ENOX1Q8TC92 643 aaKnown RBP22.89■■□□□ 1.25
LSM6-207ENST00000515311 FBXL18Q96ME1 805 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 TSPY26PQ9H489 355 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 PCDH10Q9P2E7 1040 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 IPPQ9Y573 584 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 TTC3P53804 2025 aa22.89■■□□□ 1.25
LSM6-207ENST00000515311 CEP290O15078 2479 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 RALGAPA2Q2PPJ7 1873 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 EXTL3O43909 919 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 FGBP02675 491 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 HARSP12081 509 aaKnown RBP22.88■■□□□ 1.25
LSM6-207ENST00000515311 ZNF165P49910 485 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 EPHB4P54760 987 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 POU5F1Q01860 360 aaKnown RBP22.88■■□□□ 1.25
LSM6-207ENST00000515311 LRRC55Q6ZSA7 311 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 GPD1LQ8N335 351 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 SMG8Q8ND04 991 aaKnown RBP22.88■■□□□ 1.25
LSM6-207ENST00000515311 CEP63Q96MT8 703 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 NXF3Q9H4D5 531 aaKnown RBP22.88■■□□□ 1.25
LSM6-207ENST00000515311 PCIF1Q9H4Z3 704 aa22.88■■□□□ 1.25
LSM6-207ENST00000515311 CITO14578 2027 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.87■■□□□ 1.25
LSM6-207ENST00000515311 CETN3O15182 167 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 EXOC3O60645 756 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 CAPN15O75808 1086 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 FGFR1OPO95684 399 aaKnown RBP22.87■■□□□ 1.25
LSM6-207ENST00000515311 EOMESO95936 686 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 CLTAP09496 248 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 MYL5Q02045 173 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 ADAM9Q13443 819 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 TMEM240Q5SV17 173 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 SPATA1Q5VX52 437 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 ZNF365Q70YC5 407 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 ECHDC2Q86YB7 292 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 PGBD4Q96DM1 585 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 SAAL1Q96ER3 474 aa22.87■■□□□ 1.25
LSM6-207ENST00000515311 CCDC94Q9BW85 323 aaPredicted RBP22.87■■□□□ 1.25
LSM6-207ENST00000515311 ELAC1Q9H777 363 aaKnown RBP22.87■■□□□ 1.25
LSM6-207ENST00000515311 IKBKBO14920 756 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 MAPK13O15264 365 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 STAG3L1P0CL83 205 aa22.86■■□□□ 1.25
LSM6-207ENST00000515311 ATF7P17544 494 aaPredicted RBP22.86■■□□□ 1.25
LSM6-207ENST00000515311 MAGEA10P43363 369 aaPredicted RBP22.86■■□□□ 1.25
LSM6-207ENST00000515311 CRELD2Q6UXH1 353 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms